Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Shcbp1lQ3TTP0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shcbp1lQ3TTP0 Gm13158-201ENSMUST00000122007 736 ntBASIC18.23■□□□□ 0.51
Shcbp1lQ3TTP0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.23■□□□□ 0.51
Shcbp1lQ3TTP0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shcbp1lQ3TTP0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.23■□□□□ 0.51
Shcbp1lQ3TTP0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.23■□□□□ 0.51
Shcbp1lQ3TTP0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Shcbp1lQ3TTP0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shcbp1lQ3TTP0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shcbp1lQ3TTP0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shcbp1lQ3TTP0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shcbp1lQ3TTP0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Shcbp1lQ3TTP0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shcbp1lQ3TTP0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Shcbp1lQ3TTP0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shcbp1lQ3TTP0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.21■□□□□ 0.51
Shcbp1lQ3TTP0 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.21■□□□□ 0.51
Shcbp1lQ3TTP0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shcbp1lQ3TTP0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shcbp1lQ3TTP0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shcbp1lQ3TTP0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Gm11927-201ENSMUST00000118472 759 ntBASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shcbp1lQ3TTP0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shcbp1lQ3TTP0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shcbp1lQ3TTP0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms