Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Khdc4Q3TCX3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Mir6982-201ENSMUST00000184354 68 ntBASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Khdc4Q3TCX3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Khdc4Q3TCX3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Khdc4Q3TCX3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Khdc4Q3TCX3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Khdc4Q3TCX3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Khdc4Q3TCX3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Gm5643-201ENSMUST00000117081 966 ntBASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Khdc4Q3TCX3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms