Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q3KNL4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Q3KNL4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q3KNL4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.86■□□□□ 0.45
Q3KNL4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.86■□□□□ 0.45
Q3KNL4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.86■□□□□ 0.45
Q3KNL4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Q3KNL4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q3KNL4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q3KNL4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Q3KNL4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Q3KNL4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Q3KNL4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Q3KNL4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Q3KNL4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3KNL4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Q3KNL4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Q3KNL4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Q3KNL4 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.85■□□□□ 0.45
Q3KNL4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3KNL4 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.85■□□□□ 0.45
Q3KNL4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3KNL4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Q3KNL4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Q3KNL4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3KNL4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q3KNL4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Q3KNL4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.84■□□□□ 0.45
Q3KNL4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Q3KNL4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Q3KNL4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.84■□□□□ 0.45
Q3KNL4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Q3KNL4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Q3KNL4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Q3KNL4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Q3KNL4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q3KNL4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q3KNL4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q3KNL4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q3KNL4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q3KNL4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q3KNL4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3KNL4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3KNL4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3KNL4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3KNL4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.83■□□□□ 0.44
Q3KNL4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
Q3KNL4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3KNL4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3KNL4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3KNL4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q3KNL4 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.82■□□□□ 0.44
Q3KNL4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q3KNL4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q3KNL4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.82■□□□□ 0.44
Q3KNL4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q3KNL4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Q3KNL4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Q3KNL4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q3KNL4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Q3KNL4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Q3KNL4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q3KNL4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Q3KNL4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q3KNL4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Q3KNL4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Q3KNL4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q3KNL4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q3KNL4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q3KNL4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.81■□□□□ 0.44
Q3KNL4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.81■□□□□ 0.44
Q3KNL4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Q3KNL4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q3KNL4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Q3KNL4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.81■□□□□ 0.44
Q3KNL4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Q3KNL4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.81■□□□□ 0.44
Q3KNL4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q3KNL4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q3KNL4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Q3KNL4 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.81■□□□□ 0.44
Q3KNL4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q3KNL4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Q3KNL4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Q3KNL4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q3KNL4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q3KNL4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.8■□□□□ 0.44
Q3KNL4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.8■□□□□ 0.44
Q3KNL4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms