Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pkd1l3Q2EG98 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pkd1l3Q2EG98 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pkd1l3Q2EG98 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pkd1l3Q2EG98 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pkd1l3Q2EG98 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pkd1l3Q2EG98 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pkd1l3Q2EG98 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.26■□□□□ 0.19
Pkd1l3Q2EG98 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pkd1l3Q2EG98 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.25■□□□□ 0.19
Pkd1l3Q2EG98 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pkd1l3Q2EG98 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.23■□□□□ 0.19
Pkd1l3Q2EG98 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Gm42545-201ENSMUST00000202755 922 ntBASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pkd1l3Q2EG98 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Pkd1l3Q2EG98 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pkd1l3Q2EG98 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pkd1l3Q2EG98 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pkd1l3Q2EG98 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pkd1l3Q2EG98 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pkd1l3Q2EG98 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pkd1l3Q2EG98 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Pkd1l3Q2EG98 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pkd1l3Q2EG98 Grk6-206ENSMUST00000224995 2971 ntBASIC16.21■□□□□ 0.19
Pkd1l3Q2EG98 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pkd1l3Q2EG98 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms