Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc4Q08624 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc4Q08624 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.46■□□□□ 0.39
Hoxc4Q08624 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.46■□□□□ 0.39
Hoxc4Q08624 Tgds-204ENSMUST00000228543 1594 ntBASIC17.46■□□□□ 0.39
Hoxc4Q08624 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Gm12382-201ENSMUST00000122005 922 ntBASIC17.46■□□□□ 0.39
Hoxc4Q08624 Gm37055-201ENSMUST00000191866 133 ntBASIC17.46■□□□□ 0.39
Hoxc4Q08624 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.46■□□□□ 0.39
Hoxc4Q08624 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxc4Q08624 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hoxc4Q08624 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Hoxc4Q08624 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.45■□□□□ 0.38
Hoxc4Q08624 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc4Q08624 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc4Q08624 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc4Q08624 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.45■□□□□ 0.38
Hoxc4Q08624 Gm21814-202ENSMUST00000203277 873 ntBASIC17.45■□□□□ 0.38
Hoxc4Q08624 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc4Q08624 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc4Q08624 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc4Q08624 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc4Q08624 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hoxc4Q08624 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.44■□□□□ 0.38
Hoxc4Q08624 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc4Q08624 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc4Q08624 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc4Q08624 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc4Q08624 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hoxc4Q08624 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc4Q08624 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc4Q08624 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc4Q08624 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Hoxc4Q08624 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hoxc4Q08624 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hoxc4Q08624 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hoxc4Q08624 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.43■□□□□ 0.38
Hoxc4Q08624 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hoxc4Q08624 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc4Q08624 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc4Q08624 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Hoxc4Q08624 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.42■□□□□ 0.38
Hoxc4Q08624 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc4Q08624 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.42■□□□□ 0.38
Hoxc4Q08624 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc4Q08624 Odf3b-204ENSMUST00000227834 930 ntBASIC17.42■□□□□ 0.38
Hoxc4Q08624 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc4Q08624 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hoxc4Q08624 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc4Q08624 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc4Q08624 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc4Q08624 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.41■□□□□ 0.38
Hoxc4Q08624 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hoxc4Q08624 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc4Q08624 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc4Q08624 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc4Q08624 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc4Q08624 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc4Q08624 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc4Q08624 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc4Q08624 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.4■□□□□ 0.38
Hoxc4Q08624 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc4Q08624 Gm10418-201ENSMUST00000100943 576 ntBASIC17.4■□□□□ 0.38
Hoxc4Q08624 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms