Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gcm1P70348 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gcm1P70348 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gcm1P70348 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gcm1P70348 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gcm1P70348 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.19■□□□□ 0.02
Gcm1P70348 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.19■□□□□ 0.02
Gcm1P70348 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gcm1P70348 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gcm1P70348 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Gcm1P70348 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gcm1P70348 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gcm1P70348 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.19■□□□□ 0.02
Gcm1P70348 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gcm1P70348 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gcm1P70348 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gcm1P70348 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gcm1P70348 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.18■□□□□ 0.02
Gcm1P70348 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gcm1P70348 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gcm1P70348 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gcm1P70348 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gcm1P70348 Gm12896-201ENSMUST00000118430 226 ntBASIC15.18■□□□□ 0.02
Gcm1P70348 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gcm1P70348 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Gcm1P70348 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gcm1P70348 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.18■□□□□ 0.02
Gcm1P70348 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gcm1P70348 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gcm1P70348 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Gcm1P70348 Gm13168-201ENSMUST00000121771 632 ntBASIC15.17■□□□□ 0.02
Gcm1P70348 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.17■□□□□ 0.02
Gcm1P70348 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.17■□□□□ 0.02
Gcm1P70348 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gcm1P70348 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gcm1P70348 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Gcm1P70348 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gcm1P70348 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Gcm1P70348 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gcm1P70348 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gcm1P70348 Dio3-201ENSMUST00000097228 1449 ntBASIC15.16■□□□□ 0.02
Gcm1P70348 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Gcm1P70348 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gcm1P70348 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gcm1P70348 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gcm1P70348 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gcm1P70348 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gcm1P70348 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Gcm1P70348 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.15■□□□□ 0.02
Gcm1P70348 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Gcm1P70348 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.15■□□□□ 0.02
Gcm1P70348 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gcm1P70348 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.14■□□□□ 0.01
Gcm1P70348 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gcm1P70348 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Gcm1P70348 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Gcm1P70348 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.14■□□□□ 0.01
Gcm1P70348 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Gcm1P70348 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gcm1P70348 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Gcm1P70348 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gcm1P70348 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gcm1P70348 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms