Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ThraP63058 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.33■□□□□ 0.53
ThraP63058 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ThraP63058 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ThraP63058 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ThraP63058 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ThraP63058 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ThraP63058 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ThraP63058 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.33■□□□□ 0.52
ThraP63058 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ThraP63058 Gm20049-201ENSMUST00000219950 730 ntBASIC18.33■□□□□ 0.52
ThraP63058 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.33■□□□□ 0.52
ThraP63058 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ThraP63058 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ThraP63058 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ThraP63058 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ThraP63058 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.33■□□□□ 0.52
ThraP63058 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ThraP63058 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ThraP63058 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ThraP63058 Gm8520-201ENSMUST00000186517 868 ntBASIC18.32■□□□□ 0.52
ThraP63058 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.32■□□□□ 0.52
ThraP63058 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
ThraP63058 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ThraP63058 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ThraP63058 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ThraP63058 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ThraP63058 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ThraP63058 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ThraP63058 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ThraP63058 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ThraP63058 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
ThraP63058 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ThraP63058 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ThraP63058 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ThraP63058 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ThraP63058 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ThraP63058 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ThraP63058 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ThraP63058 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.31■□□□□ 0.52
ThraP63058 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ThraP63058 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ThraP63058 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
ThraP63058 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ThraP63058 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.3■□□□□ 0.52
ThraP63058 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
ThraP63058 Gm26524-201ENSMUST00000192339 390 ntBASIC18.3■□□□□ 0.52
ThraP63058 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ThraP63058 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.3■□□□□ 0.52
ThraP63058 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ThraP63058 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
ThraP63058 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ThraP63058 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ThraP63058 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ThraP63058 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ThraP63058 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.29■□□□□ 0.52
ThraP63058 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ThraP63058 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.29■□□□□ 0.52
ThraP63058 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ThraP63058 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ThraP63058 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ThraP63058 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ThraP63058 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ThraP63058 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ThraP63058 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.28■□□□□ 0.52
ThraP63058 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.28■□□□□ 0.52
ThraP63058 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ThraP63058 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.28■□□□□ 0.52
ThraP63058 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ThraP63058 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ThraP63058 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ThraP63058 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.28■□□□□ 0.52
ThraP63058 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ThraP63058 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ThraP63058 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ThraP63058 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ThraP63058 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.27■□□□□ 0.52
ThraP63058 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ThraP63058 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ThraP63058 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ThraP63058 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ThraP63058 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
ThraP63058 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ThraP63058 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ThraP63058 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ThraP63058 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
ThraP63058 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ThraP63058 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ThraP63058 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms