Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Ybx1P62960 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ybx1P62960 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ybx1P62960 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.61■□□□□ 0.57
Ybx1P62960 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 Gm30025-201ENSMUST00000218555 728 ntBASIC18.61■□□□□ 0.57
Ybx1P62960 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ybx1P62960 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ybx1P62960 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ybx1P62960 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.6■□□□□ 0.57
Ybx1P62960 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.6■□□□□ 0.57
Ybx1P62960 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.6■□□□□ 0.57
Ybx1P62960 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.6■□□□□ 0.57
Ybx1P62960 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ybx1P62960 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.6■□□□□ 0.57
Ybx1P62960 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.6■□□□□ 0.57
Ybx1P62960 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ybx1P62960 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ybx1P62960 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ybx1P62960 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ybx1P62960 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ybx1P62960 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ybx1P62960 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ybx1P62960 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ybx1P62960 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ybx1P62960 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ybx1P62960 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.59■□□□□ 0.57
Ybx1P62960 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.59■□□□□ 0.57
Ybx1P62960 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ybx1P62960 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ybx1P62960 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ybx1P62960 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ybx1P62960 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ybx1P62960 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ybx1P62960 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ybx1P62960 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ybx1P62960 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ybx1P62960 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ybx1P62960 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.58■□□□□ 0.56
Ybx1P62960 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ybx1P62960 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ybx1P62960 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ybx1P62960 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ybx1P62960 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ybx1P62960 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ybx1P62960 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Ybx1P62960 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ybx1P62960 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ybx1P62960 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ybx1P62960 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.57■□□□□ 0.56
Ybx1P62960 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ybx1P62960 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.57■□□□□ 0.56
Ybx1P62960 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ybx1P62960 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ybx1P62960 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.57■□□□□ 0.56
Ybx1P62960 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ybx1P62960 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ybx1P62960 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ybx1P62960 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ybx1P62960 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ybx1P62960 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ybx1P62960 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Ybx1P62960 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.56■□□□□ 0.56
Ybx1P62960 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.56■□□□□ 0.56
Ybx1P62960 Gm11539-201ENSMUST00000119837 557 ntBASIC18.56■□□□□ 0.56
Ybx1P62960 Gm13436-201ENSMUST00000120418 567 ntBASIC18.56■□□□□ 0.56
Ybx1P62960 Gm13559-201ENSMUST00000120476 863 ntBASIC18.56■□□□□ 0.56
Ybx1P62960 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.56■□□□□ 0.56
Ybx1P62960 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.56■□□□□ 0.56
Ybx1P62960 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.56■□□□□ 0.56
Ybx1P62960 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ybx1P62960 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.55■□□□□ 0.56
Ybx1P62960 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms