Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cks2P56390 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cks2P56390 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.15■□□□□ 0.02
Cks2P56390 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cks2P56390 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.15■□□□□ 0.02
Cks2P56390 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Cks2P56390 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.15■□□□□ 0.02
Cks2P56390 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cks2P56390 Fst-202ENSMUST00000223640 2612 ntBASIC15.15■□□□□ 0.02
Cks2P56390 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Cks2P56390 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cks2P56390 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.14■□□□□ 0.01
Cks2P56390 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.14■□□□□ 0.01
Cks2P56390 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.14■□□□□ 0.01
Cks2P56390 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cks2P56390 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cks2P56390 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cks2P56390 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cks2P56390 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.13■□□□□ 0.01
Cks2P56390 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cks2P56390 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Cks2P56390 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.13■□□□□ 0.01
Cks2P56390 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.13■□□□□ 0.01
Cks2P56390 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.13■□□□□ 0.01
Cks2P56390 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cks2P56390 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.13■□□□□ 0.01
Cks2P56390 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Cks2P56390 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cks2P56390 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks2P56390 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks2P56390 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks2P56390 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks2P56390 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.12■□□□□ 0.01
Cks2P56390 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks2P56390 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.12■□□□□ 0.01
Cks2P56390 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks2P56390 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks2P56390 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks2P56390 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks2P56390 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.12■□□□□ 0.01
Cks2P56390 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks2P56390 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cks2P56390 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cks2P56390 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks2P56390 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cks2P56390 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cks2P56390 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms