Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.34□□□□□ -0.11
Rab4aP56371 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab4aP56371 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rab4aP56371 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rab4aP56371 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rab4aP56371 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rab4aP56371 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rab4aP56371 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rab4aP56371 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.33□□□□□ -0.12
Rab4aP56371 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.33□□□□□ -0.12
Rab4aP56371 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.33□□□□□ -0.12
Rab4aP56371 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Rab4aP56371 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rab4aP56371 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.33□□□□□ -0.12
Rab4aP56371 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.33□□□□□ -0.12
Rab4aP56371 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rab4aP56371 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab4aP56371 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rab4aP56371 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rab4aP56371 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.32□□□□□ -0.12
Rab4aP56371 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.32□□□□□ -0.12
Rab4aP56371 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.32□□□□□ -0.12
Rab4aP56371 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rab4aP56371 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab4aP56371 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rab4aP56371 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.31□□□□□ -0.12
Rab4aP56371 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Rab4aP56371 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rab4aP56371 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.31□□□□□ -0.12
Rab4aP56371 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rab4aP56371 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rab4aP56371 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Rab4aP56371 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.3□□□□□ -0.12
Rab4aP56371 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.3□□□□□ -0.12
Rab4aP56371 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rab4aP56371 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.3□□□□□ -0.12
Rab4aP56371 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.3□□□□□ -0.12
Rab4aP56371 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab4aP56371 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab4aP56371 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab4aP56371 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.29□□□□□ -0.12
Rab4aP56371 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rab4aP56371 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab4aP56371 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab4aP56371 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab4aP56371 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab4aP56371 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rab4aP56371 Gm10420-201ENSMUST00000121713 882 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms