Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.38■□□□□ 0.37
Cdkn2bP55271 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn2bP55271 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn2bP55271 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.38■□□□□ 0.37
Cdkn2bP55271 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn2bP55271 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn2bP55271 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn2bP55271 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn2bP55271 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn2bP55271 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn2bP55271 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn2bP55271 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn2bP55271 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkn2bP55271 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdkn2bP55271 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkn2bP55271 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkn2bP55271 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.36■□□□□ 0.37
Cdkn2bP55271 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cdkn2bP55271 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.35■□□□□ 0.37
Cdkn2bP55271 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.35■□□□□ 0.37
Cdkn2bP55271 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkn2bP55271 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cdkn2bP55271 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkn2bP55271 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.33■□□□□ 0.37
Cdkn2bP55271 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkn2bP55271 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkn2bP55271 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkn2bP55271 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkn2bP55271 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkn2bP55271 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkn2bP55271 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.33■□□□□ 0.36
Cdkn2bP55271 Gm22325-201ENSMUST00000158904 308 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms