Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Lbx1P52955 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.55■□□□□ 0.4
Lbx1P52955 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.55■□□□□ 0.4
Lbx1P52955 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.55■□□□□ 0.4
Lbx1P52955 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.55■□□□□ 0.4
Lbx1P52955 Gm18195-201ENSMUST00000207604 706 ntBASIC17.55■□□□□ 0.4
Lbx1P52955 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lbx1P52955 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lbx1P52955 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.54■□□□□ 0.4
Lbx1P52955 Gm27742-201ENSMUST00000184667 60 ntBASIC17.54■□□□□ 0.4
Lbx1P52955 Gm43438-201ENSMUST00000198133 379 ntBASIC17.54■□□□□ 0.4
Lbx1P52955 Gm43347-201ENSMUST00000200226 580 ntBASIC17.54■□□□□ 0.4
Lbx1P52955 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.54■□□□□ 0.4
Lbx1P52955 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lbx1P52955 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lbx1P52955 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lbx1P52955 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lbx1P52955 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Lbx1P52955 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lbx1P52955 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.53■□□□□ 0.4
Lbx1P52955 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.53■□□□□ 0.4
Lbx1P52955 Gm11950-201ENSMUST00000121615 838 ntBASIC17.53■□□□□ 0.4
Lbx1P52955 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lbx1P52955 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lbx1P52955 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lbx1P52955 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.53■□□□□ 0.4
Lbx1P52955 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.53■□□□□ 0.4
Lbx1P52955 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lbx1P52955 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lbx1P52955 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lbx1P52955 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lbx1P52955 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.52■□□□□ 0.4
Lbx1P52955 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lbx1P52955 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lbx1P52955 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.52■□□□□ 0.4
Lbx1P52955 Gm8000-201ENSMUST00000188378 592 ntBASIC17.52■□□□□ 0.4
Lbx1P52955 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.52■□□□□ 0.4
Lbx1P52955 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lbx1P52955 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lbx1P52955 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lbx1P52955 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lbx1P52955 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Lbx1P52955 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Lbx1P52955 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.51■□□□□ 0.39
Lbx1P52955 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lbx1P52955 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lbx1P52955 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lbx1P52955 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lbx1P52955 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lbx1P52955 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.51■□□□□ 0.39
Lbx1P52955 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lbx1P52955 Gm27702-201ENSMUST00000184512 56 ntBASIC17.51■□□□□ 0.39
Lbx1P52955 Gm38027-201ENSMUST00000192315 235 ntBASIC17.51■□□□□ 0.39
Lbx1P52955 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.51■□□□□ 0.39
Lbx1P52955 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.51■□□□□ 0.39
Lbx1P52955 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lbx1P52955 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lbx1P52955 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lbx1P52955 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lbx1P52955 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.51■□□□□ 0.39
Lbx1P52955 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lbx1P52955 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lbx1P52955 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.5■□□□□ 0.39
Lbx1P52955 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Lbx1P52955 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lbx1P52955 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lbx1P52955 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.5■□□□□ 0.39
Lbx1P52955 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lbx1P52955 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lbx1P52955 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lbx1P52955 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lbx1P52955 Gm13474-201ENSMUST00000122466 815 ntBASIC17.49■□□□□ 0.39
Lbx1P52955 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms