Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RoraP51448 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.11■□□□□ 0.33
RoraP51448 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RoraP51448 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.11■□□□□ 0.33
RoraP51448 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.11■□□□□ 0.33
RoraP51448 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RoraP51448 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RoraP51448 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RoraP51448 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.11■□□□□ 0.33
RoraP51448 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RoraP51448 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.11■□□□□ 0.33
RoraP51448 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RoraP51448 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RoraP51448 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RoraP51448 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RoraP51448 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RoraP51448 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RoraP51448 Gm15378-201ENSMUST00000121894 207 ntBASIC17.1■□□□□ 0.33
RoraP51448 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.1■□□□□ 0.33
RoraP51448 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RoraP51448 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RoraP51448 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RoraP51448 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RoraP51448 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RoraP51448 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.1■□□□□ 0.33
RoraP51448 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RoraP51448 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
RoraP51448 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RoraP51448 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.1■□□□□ 0.33
RoraP51448 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RoraP51448 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RoraP51448 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RoraP51448 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.09■□□□□ 0.33
RoraP51448 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Gm6576-201ENSMUST00000169678 883 ntBASIC17.09■□□□□ 0.33
RoraP51448 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.09■□□□□ 0.33
RoraP51448 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.09■□□□□ 0.33
RoraP51448 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.09■□□□□ 0.33
RoraP51448 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.09■□□□□ 0.33
RoraP51448 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RoraP51448 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RoraP51448 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RoraP51448 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RoraP51448 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RoraP51448 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RoraP51448 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RoraP51448 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RoraP51448 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RoraP51448 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RoraP51448 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RoraP51448 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RoraP51448 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.08■□□□□ 0.32
RoraP51448 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.08■□□□□ 0.32
RoraP51448 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.08■□□□□ 0.32
RoraP51448 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RoraP51448 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RoraP51448 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RoraP51448 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RoraP51448 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RoraP51448 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RoraP51448 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RoraP51448 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RoraP51448 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.07■□□□□ 0.32
RoraP51448 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.07■□□□□ 0.32
RoraP51448 Zfp783-201ENSMUST00000095946 670 ntBASIC17.07■□□□□ 0.32
RoraP51448 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RoraP51448 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RoraP51448 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.07■□□□□ 0.32
RoraP51448 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.06■□□□□ 0.32
RoraP51448 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RoraP51448 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RoraP51448 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RoraP51448 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.06■□□□□ 0.32
RoraP51448 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RoraP51448 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RoraP51448 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RoraP51448 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms