Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
SftpbP50405 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.56■□□□□ 0.56
SftpbP50405 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SftpbP50405 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SftpbP50405 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.56■□□□□ 0.56
SftpbP50405 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.56■□□□□ 0.56
SftpbP50405 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SftpbP50405 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Gm13146-201ENSMUST00000118508 780 ntBASIC18.55■□□□□ 0.56
SftpbP50405 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SftpbP50405 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.54■□□□□ 0.56
SftpbP50405 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
SftpbP50405 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SftpbP50405 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SftpbP50405 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SftpbP50405 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SftpbP50405 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.53■□□□□ 0.56
SftpbP50405 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SftpbP50405 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SftpbP50405 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SftpbP50405 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SftpbP50405 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.52■□□□□ 0.56
SftpbP50405 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.52■□□□□ 0.56
SftpbP50405 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.52■□□□□ 0.56
SftpbP50405 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.52■□□□□ 0.56
SftpbP50405 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.52■□□□□ 0.56
SftpbP50405 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.52■□□□□ 0.56
SftpbP50405 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SftpbP50405 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.52■□□□□ 0.55
SftpbP50405 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SftpbP50405 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Gm13534-201ENSMUST00000121169 513 ntBASIC18.51■□□□□ 0.55
SftpbP50405 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
SftpbP50405 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.5■□□□□ 0.55
SftpbP50405 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms