Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
SftpbP50405 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.56■□□□□ 0.56
SftpbP50405 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SftpbP50405 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SftpbP50405 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SftpbP50405 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.56■□□□□ 0.56
SftpbP50405 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.56■□□□□ 0.56
SftpbP50405 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SftpbP50405 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Gm13146-201ENSMUST00000118508 780 ntBASIC18.55■□□□□ 0.56
SftpbP50405 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SftpbP50405 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SftpbP50405 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.54■□□□□ 0.56
SftpbP50405 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
SftpbP50405 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SftpbP50405 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SftpbP50405 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SftpbP50405 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SftpbP50405 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SftpbP50405 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.53■□□□□ 0.56
SftpbP50405 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SftpbP50405 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SftpbP50405 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SftpbP50405 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SftpbP50405 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.52■□□□□ 0.56
SftpbP50405 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.52■□□□□ 0.56
SftpbP50405 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.52■□□□□ 0.56
SftpbP50405 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.52■□□□□ 0.56
SftpbP50405 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.52■□□□□ 0.56
SftpbP50405 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.52■□□□□ 0.56
SftpbP50405 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SftpbP50405 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SftpbP50405 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.52■□□□□ 0.55
SftpbP50405 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SftpbP50405 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Gm13534-201ENSMUST00000121169 513 ntBASIC18.51■□□□□ 0.55
SftpbP50405 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
SftpbP50405 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SftpbP50405 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.5■□□□□ 0.55
SftpbP50405 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SftpbP50405 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms