Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-1P50220 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx2-1P50220 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-1P50220 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-1P50220 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.03■□□□□ -0
Nkx2-1P50220 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.03■□□□□ -0
Nkx2-1P50220 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nkx2-1P50220 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-1P50220 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.03■□□□□ -0
Nkx2-1P50220 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-1P50220 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.03■□□□□ -0
Nkx2-1P50220 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-1P50220 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx2-1P50220 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-1P50220 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-1P50220 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-1P50220 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.03■□□□□ -0
Nkx2-1P50220 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nkx2-1P50220 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-1P50220 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-1P50220 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-1P50220 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-1P50220 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-1P50220 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-1P50220 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-1P50220 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nkx2-1P50220 Gm7860-201ENSMUST00000121190 879 ntBASIC15.02■□□□□ -0
Nkx2-1P50220 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-1P50220 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.02■□□□□ -0
Nkx2-1P50220 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.02■□□□□ -0
Nkx2-1P50220 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-1P50220 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Nkx2-1P50220 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-1P50220 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-1P50220 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-1P50220 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-1P50220 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Nkx2-1P50220 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-1P50220 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Nkx2-1P50220 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-1P50220 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nkx2-1P50220 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15□□□□□ -0.01
Nkx2-1P50220 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15□□□□□ -0.01
Nkx2-1P50220 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15□□□□□ -0.01
Nkx2-1P50220 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nkx2-1P50220 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Gm9194-201ENSMUST00000220749 1447 ntBASIC15□□□□□ -0.01
Nkx2-1P50220 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-1P50220 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.99□□□□□ -0.01
Nkx2-1P50220 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Gm21956-201ENSMUST00000179946 522 ntBASIC14.99□□□□□ -0.01
Nkx2-1P50220 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.99□□□□□ -0.01
Nkx2-1P50220 Gm43137-201ENSMUST00000198052 594 ntBASIC14.99□□□□□ -0.01
Nkx2-1P50220 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms