Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox18P43680 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox18P43680 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.35■□□□□ 0.37
Sox18P43680 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox18P43680 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.35■□□□□ 0.37
Sox18P43680 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox18P43680 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox18P43680 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.34■□□□□ 0.37
Sox18P43680 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox18P43680 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox18P43680 Gm37292-201ENSMUST00000192062 758 ntBASIC17.34■□□□□ 0.37
Sox18P43680 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.34■□□□□ 0.37
Sox18P43680 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.34■□□□□ 0.37
Sox18P43680 Zfp783-201ENSMUST00000095946 670 ntBASIC17.34■□□□□ 0.37
Sox18P43680 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sox18P43680 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Sox18P43680 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
Sox18P43680 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox18P43680 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Sox18P43680 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sox18P43680 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.33■□□□□ 0.37
Sox18P43680 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.33■□□□□ 0.36
Sox18P43680 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.33■□□□□ 0.36
Sox18P43680 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox18P43680 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox18P43680 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Sox18P43680 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox18P43680 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox18P43680 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox18P43680 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox18P43680 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sox18P43680 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox18P43680 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sox18P43680 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox18P43680 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox18P43680 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox18P43680 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox18P43680 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.32■□□□□ 0.36
Sox18P43680 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.32■□□□□ 0.36
Sox18P43680 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sox18P43680 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox18P43680 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.32■□□□□ 0.36
Sox18P43680 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.32■□□□□ 0.36
Sox18P43680 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox18P43680 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sox18P43680 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox18P43680 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Sox18P43680 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox18P43680 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox18P43680 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox18P43680 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sox18P43680 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox18P43680 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox18P43680 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox18P43680 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox18P43680 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox18P43680 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox18P43680 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sox18P43680 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.31■□□□□ 0.36
Sox18P43680 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sox18P43680 Gm7461-201ENSMUST00000058918 827 ntBASIC17.31■□□□□ 0.36
Sox18P43680 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sox18P43680 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox18P43680 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox18P43680 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox18P43680 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.3■□□□□ 0.36
Sox18P43680 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.3■□□□□ 0.36
Sox18P43680 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Sox18P43680 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.3■□□□□ 0.36
Sox18P43680 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox18P43680 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sox18P43680 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sox18P43680 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sox18P43680 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sox18P43680 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.29■□□□□ 0.36
Sox18P43680 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.29■□□□□ 0.36
Sox18P43680 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.29■□□□□ 0.36
Sox18P43680 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.29■□□□□ 0.36
Sox18P43680 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms