Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.64■□□□□ 0.25
Nkx2-2P42586 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.64■□□□□ 0.25
Nkx2-2P42586 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nkx2-2P42586 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-2P42586 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-2P42586 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-2P42586 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.62■□□□□ 0.25
Nkx2-2P42586 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.62■□□□□ 0.25
Nkx2-2P42586 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Gm38285-201ENSMUST00000192928 922 ntBASIC16.61■□□□□ 0.25
Nkx2-2P42586 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.61■□□□□ 0.25
Nkx2-2P42586 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Nkx2-2P42586 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.6■□□□□ 0.25
Nkx2-2P42586 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nkx2-2P42586 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx2-2P42586 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-2P42586 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-2P42586 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-2P42586 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-2P42586 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-2P42586 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-2P42586 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-2P42586 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.59■□□□□ 0.25
Nkx2-2P42586 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx2-2P42586 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.59■□□□□ 0.25
Nkx2-2P42586 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms