Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15□□□□□ -0.01
Abca1P41233 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca1P41233 Gm5417-201ENSMUST00000079706 384 ntBASIC15□□□□□ -0.01
Abca1P41233 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca1P41233 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca1P41233 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca1P41233 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca1P41233 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Abca1P41233 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15□□□□□ -0.01
Abca1P41233 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca1P41233 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abca1P41233 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca1P41233 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Abca1P41233 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.99□□□□□ -0.01
Abca1P41233 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Abca1P41233 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.99□□□□□ -0.01
Abca1P41233 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca1P41233 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Abca1P41233 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca1P41233 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Abca1P41233 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca1P41233 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.99□□□□□ -0.01
Abca1P41233 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Abca1P41233 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Abca1P41233 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Abca1P41233 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Abca1P41233 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Abca1P41233 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.98□□□□□ -0.01
Abca1P41233 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.98□□□□□ -0.01
Abca1P41233 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Abca1P41233 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Abca1P41233 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca1P41233 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Abca1P41233 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca1P41233 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca1P41233 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca1P41233 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.97□□□□□ -0.01
Abca1P41233 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca1P41233 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Abca1P41233 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca1P41233 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca1P41233 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Abca1P41233 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Abca1P41233 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca1P41233 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca1P41233 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Abca1P41233 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca1P41233 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca1P41233 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca1P41233 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Abca1P41233 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Abca1P41233 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca1P41233 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Abca1P41233 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.96□□□□□ -0.01
Abca1P41233 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Abca1P41233 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Abca1P41233 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Abca1P41233 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
Abca1P41233 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Abca1P41233 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca1P41233 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Abca1P41233 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca1P41233 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Abca1P41233 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.95□□□□□ -0.02
Abca1P41233 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.95□□□□□ -0.02
Abca1P41233 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Abca1P41233 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Abca1P41233 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca1P41233 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca1P41233 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.95□□□□□ -0.02
Abca1P41233 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca1P41233 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca1P41233 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca1P41233 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.95□□□□□ -0.02
Abca1P41233 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca1P41233 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Abca1P41233 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms