Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LdlrP35951 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LdlrP35951 Gm13234-201ENSMUST00000120010 747 ntBASIC18.01■□□□□ 0.47
LdlrP35951 Gm9988-201ENSMUST00000069786 435 ntBASIC18.01■□□□□ 0.47
LdlrP35951 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.01■□□□□ 0.47
LdlrP35951 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LdlrP35951 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LdlrP35951 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LdlrP35951 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LdlrP35951 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LdlrP35951 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.01■□□□□ 0.47
LdlrP35951 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LdlrP35951 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Fcho2-208ENSMUST00000224992 2964 ntBASIC18■□□□□ 0.47
LdlrP35951 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LdlrP35951 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18■□□□□ 0.47
LdlrP35951 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Gm38205-201ENSMUST00000192243 258 ntBASIC18■□□□□ 0.47
LdlrP35951 Gm19094-201ENSMUST00000209791 1246 ntBASIC18■□□□□ 0.47
LdlrP35951 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Gm10167-201ENSMUST00000150411 1479 ntBASIC18■□□□□ 0.47
LdlrP35951 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
LdlrP35951 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LdlrP35951 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LdlrP35951 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LdlrP35951 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.99■□□□□ 0.47
LdlrP35951 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LdlrP35951 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LdlrP35951 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.99■□□□□ 0.47
LdlrP35951 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.99■□□□□ 0.47
LdlrP35951 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LdlrP35951 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LdlrP35951 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.99■□□□□ 0.47
LdlrP35951 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.99■□□□□ 0.47
LdlrP35951 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.99■□□□□ 0.47
LdlrP35951 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.99■□□□□ 0.47
LdlrP35951 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LdlrP35951 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LdlrP35951 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LdlrP35951 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LdlrP35951 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LdlrP35951 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LdlrP35951 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LdlrP35951 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LdlrP35951 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LdlrP35951 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LdlrP35951 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.98■□□□□ 0.47
LdlrP35951 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LdlrP35951 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LdlrP35951 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LdlrP35951 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LdlrP35951 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LdlrP35951 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LdlrP35951 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LdlrP35951 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.97■□□□□ 0.47
LdlrP35951 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LdlrP35951 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LdlrP35951 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.97■□□□□ 0.47
LdlrP35951 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
LdlrP35951 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.97■□□□□ 0.47
LdlrP35951 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LdlrP35951 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LdlrP35951 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LdlrP35951 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.96■□□□□ 0.47
LdlrP35951 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LdlrP35951 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
LdlrP35951 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LdlrP35951 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LdlrP35951 Gm12441-201ENSMUST00000121806 588 ntBASIC17.96■□□□□ 0.47
LdlrP35951 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LdlrP35951 Nespas-201ENSMUST00000143738 1083 ntBASIC17.96■□□□□ 0.47
LdlrP35951 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LdlrP35951 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LdlrP35951 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.96■□□□□ 0.47
LdlrP35951 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.96■□□□□ 0.47
LdlrP35951 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LdlrP35951 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms