Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.76■□□□□ 0.27
Foxa1P35582 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.76■□□□□ 0.27
Foxa1P35582 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.76■□□□□ 0.27
Foxa1P35582 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.76■□□□□ 0.27
Foxa1P35582 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Foxa1P35582 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxa1P35582 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Foxa1P35582 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Foxa1P35582 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Foxa1P35582 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.75■□□□□ 0.27
Foxa1P35582 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxa1P35582 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Foxa1P35582 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Foxa1P35582 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.74■□□□□ 0.27
Foxa1P35582 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Foxa1P35582 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Foxa1P35582 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.74■□□□□ 0.27
Foxa1P35582 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Foxa1P35582 Gm12441-201ENSMUST00000121806 588 ntBASIC16.74■□□□□ 0.27
Foxa1P35582 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Foxa1P35582 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Foxa1P35582 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Foxa1P35582 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.74■□□□□ 0.27
Foxa1P35582 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Foxa1P35582 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Foxa1P35582 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Foxa1P35582 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.73■□□□□ 0.27
Foxa1P35582 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Foxa1P35582 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.73■□□□□ 0.27
Foxa1P35582 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.73■□□□□ 0.27
Foxa1P35582 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Foxa1P35582 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.73■□□□□ 0.27
Foxa1P35582 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Foxa1P35582 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxa1P35582 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.73■□□□□ 0.27
Foxa1P35582 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.73■□□□□ 0.27
Foxa1P35582 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Foxa1P35582 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxa1P35582 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Foxa1P35582 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Foxa1P35582 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Foxa1P35582 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxa1P35582 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Foxa1P35582 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Foxa1P35582 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.72■□□□□ 0.27
Foxa1P35582 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxa1P35582 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Foxa1P35582 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.72■□□□□ 0.27
Foxa1P35582 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.72■□□□□ 0.27
Foxa1P35582 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxa1P35582 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxa1P35582 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Foxa1P35582 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxa1P35582 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Foxa1P35582 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxa1P35582 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.71■□□□□ 0.27
Foxa1P35582 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.71■□□□□ 0.27
Foxa1P35582 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxa1P35582 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.71■□□□□ 0.27
Foxa1P35582 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxa1P35582 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.71■□□□□ 0.27
Foxa1P35582 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.71■□□□□ 0.27
Foxa1P35582 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.71■□□□□ 0.27
Foxa1P35582 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.71■□□□□ 0.27
Foxa1P35582 Fst-202ENSMUST00000223640 2612 ntBASIC16.71■□□□□ 0.27
Foxa1P35582 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms