Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rom1P32958 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.37□□□□□ -0.11
Rom1P32958 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.37□□□□□ -0.11
Rom1P32958 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.37□□□□□ -0.11
Rom1P32958 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.37□□□□□ -0.11
Rom1P32958 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.37□□□□□ -0.11
Rom1P32958 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rom1P32958 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.37□□□□□ -0.11
Rom1P32958 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rom1P32958 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rom1P32958 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rom1P32958 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rom1P32958 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rom1P32958 Tgds-204ENSMUST00000228543 1594 ntBASIC14.36□□□□□ -0.11
Rom1P32958 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rom1P32958 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rom1P32958 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.36□□□□□ -0.11
Rom1P32958 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rom1P32958 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.36□□□□□ -0.11
Rom1P32958 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rom1P32958 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rom1P32958 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rom1P32958 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rom1P32958 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rom1P32958 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rom1P32958 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.35□□□□□ -0.11
Rom1P32958 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Rom1P32958 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.35□□□□□ -0.11
Rom1P32958 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.35□□□□□ -0.11
Rom1P32958 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.35□□□□□ -0.11
Rom1P32958 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.35□□□□□ -0.11
Rom1P32958 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rom1P32958 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rom1P32958 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rom1P32958 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rom1P32958 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Rom1P32958 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.34□□□□□ -0.11
Rom1P32958 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Rom1P32958 Spcs1-204ENSMUST00000226782 949 ntBASIC14.34□□□□□ -0.11
Rom1P32958 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.34□□□□□ -0.11
Rom1P32958 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rom1P32958 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rom1P32958 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.34□□□□□ -0.11
Rom1P32958 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rom1P32958 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rom1P32958 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rom1P32958 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms