Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.98■□□□□ 0.95
Vcam1P29533 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vcam1P29533 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vcam1P29533 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vcam1P29533 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vcam1P29533 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Vcam1P29533 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vcam1P29533 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vcam1P29533 Gm30025-201ENSMUST00000218555 728 ntBASIC20.97■□□□□ 0.95
Vcam1P29533 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vcam1P29533 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vcam1P29533 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vcam1P29533 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.97■□□□□ 0.95
Vcam1P29533 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vcam1P29533 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vcam1P29533 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vcam1P29533 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vcam1P29533 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vcam1P29533 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vcam1P29533 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vcam1P29533 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Vcam1P29533 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.95■□□□□ 0.95
Vcam1P29533 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Vcam1P29533 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vcam1P29533 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vcam1P29533 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vcam1P29533 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vcam1P29533 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vcam1P29533 Gm10231-201ENSMUST00000181584 441 ntBASIC20.95■□□□□ 0.94
Vcam1P29533 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vcam1P29533 Gm10175-202ENSMUST00000208752 441 ntBASIC20.95■□□□□ 0.94
Vcam1P29533 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.95■□□□□ 0.94
Vcam1P29533 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vcam1P29533 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcam1P29533 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Vcam1P29533 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcam1P29533 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcam1P29533 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcam1P29533 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vcam1P29533 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcam1P29533 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcam1P29533 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcam1P29533 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcam1P29533 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.93■□□□□ 0.94
Vcam1P29533 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.93■□□□□ 0.94
Vcam1P29533 Gm11539-201ENSMUST00000119837 557 ntBASIC20.93■□□□□ 0.94
Vcam1P29533 Gm13436-201ENSMUST00000120418 567 ntBASIC20.93■□□□□ 0.94
Vcam1P29533 Gm13559-201ENSMUST00000120476 863 ntBASIC20.93■□□□□ 0.94
Vcam1P29533 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.93■□□□□ 0.94
Vcam1P29533 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcam1P29533 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vcam1P29533 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.93■□□□□ 0.94
Vcam1P29533 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcam1P29533 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Vcam1P29533 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcam1P29533 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vcam1P29533 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vcam1P29533 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vcam1P29533 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vcam1P29533 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Vcam1P29533 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.92■□□□□ 0.94
Vcam1P29533 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vcam1P29533 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vcam1P29533 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.92■□□□□ 0.94
Vcam1P29533 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vcam1P29533 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vcam1P29533 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Vcam1P29533 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vcam1P29533 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vcam1P29533 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vcam1P29533 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vcam1P29533 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vcam1P29533 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Vcam1P29533 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.91■□□□□ 0.94
Vcam1P29533 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vcam1P29533 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcam1P29533 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.9■□□□□ 0.94
Vcam1P29533 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Vcam1P29533 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Vcam1P29533 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vcam1P29533 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcam1P29533 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcam1P29533 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcam1P29533 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcam1P29533 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcam1P29533 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcam1P29533 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcam1P29533 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vcam1P29533 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
Vcam1P29533 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vcam1P29533 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vcam1P29533 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vcam1P29533 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.89■□□□□ 0.93
Vcam1P29533 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vcam1P29533 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vcam1P29533 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vcam1P29533 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vcam1P29533 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vcam1P29533 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.89■□□□□ 0.93
Vcam1P29533 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms