Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col2a1P28481 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Col2a1P28481 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col2a1P28481 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Col2a1P28481 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col2a1P28481 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.69■□□□□ 0.9
Col2a1P28481 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.69■□□□□ 0.9
Col2a1P28481 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col2a1P28481 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col2a1P28481 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Col2a1P28481 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col2a1P28481 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Col2a1P28481 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.69■□□□□ 0.9
Col2a1P28481 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col2a1P28481 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col2a1P28481 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col2a1P28481 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col2a1P28481 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.68■□□□□ 0.9
Col2a1P28481 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col2a1P28481 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col2a1P28481 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col2a1P28481 Gm4974-201ENSMUST00000209974 875 ntBASIC20.68■□□□□ 0.9
Col2a1P28481 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.68■□□□□ 0.9
Col2a1P28481 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col2a1P28481 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col2a1P28481 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col2a1P28481 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col2a1P28481 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col2a1P28481 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Col2a1P28481 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col2a1P28481 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col2a1P28481 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col2a1P28481 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col2a1P28481 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Col2a1P28481 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col2a1P28481 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col2a1P28481 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col2a1P28481 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col2a1P28481 Gm7889-201ENSMUST00000185591 958 ntBASIC20.67■□□□□ 0.9
Col2a1P28481 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col2a1P28481 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Col2a1P28481 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Col2a1P28481 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col2a1P28481 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col2a1P28481 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.66■□□□□ 0.9
Col2a1P28481 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col2a1P28481 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col2a1P28481 Gm29791-202ENSMUST00000207888 369 ntBASIC20.66■□□□□ 0.9
Col2a1P28481 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col2a1P28481 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col2a1P28481 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col2a1P28481 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col2a1P28481 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col2a1P28481 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col2a1P28481 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col2a1P28481 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.65■□□□□ 0.9
Col2a1P28481 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Col2a1P28481 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col2a1P28481 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.65■□□□□ 0.9
Col2a1P28481 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col2a1P28481 Gm38027-201ENSMUST00000192315 235 ntBASIC20.65■□□□□ 0.9
Col2a1P28481 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Col2a1P28481 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col2a1P28481 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col2a1P28481 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col2a1P28481 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.64■□□□□ 0.89
Col2a1P28481 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col2a1P28481 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col2a1P28481 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col2a1P28481 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col2a1P28481 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Col2a1P28481 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col2a1P28481 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
Col2a1P28481 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col2a1P28481 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col2a1P28481 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col2a1P28481 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.63■□□□□ 0.89
Col2a1P28481 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.63■□□□□ 0.89
Col2a1P28481 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col2a1P28481 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.62■□□□□ 0.89
Col2a1P28481 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col2a1P28481 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col2a1P28481 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.62■□□□□ 0.89
Col2a1P28481 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.62■□□□□ 0.89
Col2a1P28481 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Col2a1P28481 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col2a1P28481 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col2a1P28481 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col2a1P28481 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col2a1P28481 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.62■□□□□ 0.89
Col2a1P28481 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Col2a1P28481 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.62■□□□□ 0.89
Col2a1P28481 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.62■□□□□ 0.89
Col2a1P28481 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col2a1P28481 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col2a1P28481 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Col2a1P28481 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col2a1P28481 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col2a1P28481 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col2a1P28481 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms