Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 Gm2399-201ENSMUST00000104944 225 ntBASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Tnfrsf1bP25119 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Gm2559-201ENSMUST00000201323 363 ntBASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf1bP25119 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf1bP25119 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 Gm12896-201ENSMUST00000118430 226 ntBASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 Gm20049-201ENSMUST00000219950 730 ntBASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf1bP25119 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tnfrsf1bP25119 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.77■□□□□ 0.28
Tnfrsf1bP25119 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf1bP25119 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf1bP25119 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tnfrsf1bP25119 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf1bP25119 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf1bP25119 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf1bP25119 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tnfrsf1bP25119 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Tnfrsf1bP25119 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tnfrsf1bP25119 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.77■□□□□ 0.27
Tnfrsf1bP25119 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.77■□□□□ 0.27
Tnfrsf1bP25119 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tnfrsf1bP25119 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tnfrsf1bP25119 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf1bP25119 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Gm12527-201ENSMUST00000117967 564 ntBASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf1bP25119 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms