Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Pde6bP23440 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Pde6bP23440 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6bP23440 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pde6bP23440 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6bP23440 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6bP23440 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pde6bP23440 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6bP23440 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6bP23440 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Pde6bP23440 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6bP23440 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.69■□□□□ 0.74
Pde6bP23440 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6bP23440 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.69■□□□□ 0.74
Pde6bP23440 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.69■□□□□ 0.74
Pde6bP23440 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6bP23440 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6bP23440 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pde6bP23440 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Pde6bP23440 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pde6bP23440 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 Zfp783-201ENSMUST00000095946 670 ntBASIC19.68■□□□□ 0.74
Pde6bP23440 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 Golph3-205ENSMUST00000228671 2842 ntBASIC19.68■□□□□ 0.74
Pde6bP23440 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6bP23440 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6bP23440 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6bP23440 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6bP23440 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pde6bP23440 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6bP23440 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Pde6bP23440 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6bP23440 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6bP23440 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6bP23440 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6bP23440 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.66■□□□□ 0.74
Pde6bP23440 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6bP23440 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.66■□□□□ 0.74
Pde6bP23440 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.66■□□□□ 0.74
Pde6bP23440 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6bP23440 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6bP23440 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6bP23440 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6bP23440 Mtag2-201ENSMUST00000058665 714 ntBASIC19.66■□□□□ 0.74
Pde6bP23440 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6bP23440 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6bP23440 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6bP23440 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6bP23440 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6bP23440 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6bP23440 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6bP23440 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6bP23440 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.65■□□□□ 0.74
Pde6bP23440 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6bP23440 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6bP23440 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6bP23440 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6bP23440 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6bP23440 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.65■□□□□ 0.74
Pde6bP23440 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.65■□□□□ 0.74
Pde6bP23440 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pde6bP23440 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.64■□□□□ 0.74
Pde6bP23440 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Pde6bP23440 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Pde6bP23440 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pde6bP23440 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6bP23440 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pde6bP23440 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.64■□□□□ 0.73
Pde6bP23440 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.64■□□□□ 0.73
Pde6bP23440 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.64■□□□□ 0.73
Pde6bP23440 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pde6bP23440 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.64■□□□□ 0.73
Pde6bP23440 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6bP23440 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6bP23440 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6bP23440 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6bP23440 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6bP23440 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6bP23440 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.64■□□□□ 0.73
Pde6bP23440 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6bP23440 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6bP23440 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6bP23440 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6bP23440 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6bP23440 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pde6bP23440 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pde6bP23440 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pde6bP23440 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6bP23440 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.63■□□□□ 0.73
Pde6bP23440 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Pde6bP23440 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms