Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cdx1P18111 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.6□□□□□ -0.07
Cdx1P18111 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdx1P18111 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdx1P18111 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdx1P18111 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdx1P18111 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdx1P18111 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdx1P18111 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdx1P18111 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Cdx1P18111 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cdx1P18111 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cdx1P18111 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cdx1P18111 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Cdx1P18111 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdx1P18111 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cdx1P18111 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cdx1P18111 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.59□□□□□ -0.07
Cdx1P18111 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.59□□□□□ -0.07
Cdx1P18111 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdx1P18111 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdx1P18111 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdx1P18111 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdx1P18111 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cdx1P18111 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Cdx1P18111 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cdx1P18111 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Cdx1P18111 Gm43060-201ENSMUST00000200621 289 ntBASIC14.58□□□□□ -0.08
Cdx1P18111 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.58□□□□□ -0.08
Cdx1P18111 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdx1P18111 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx1P18111 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx1P18111 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cdx1P18111 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cdx1P18111 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx1P18111 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdx1P18111 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.57□□□□□ -0.08
Cdx1P18111 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx1P18111 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx1P18111 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx1P18111 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx1P18111 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdx1P18111 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx1P18111 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx1P18111 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdx1P18111 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdx1P18111 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx1P18111 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cdx1P18111 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cdx1P18111 Gm10493-201ENSMUST00000097270 612 ntBASIC14.56□□□□□ -0.08
Cdx1P18111 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx1P18111 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx1P18111 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx1P18111 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx1P18111 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms