Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.01■□□□□ 0.95
Usp53P15975 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp53P15975 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp53P15975 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp53P15975 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Usp53P15975 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp53P15975 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21■□□□□ 0.95
Usp53P15975 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Usp53P15975 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Usp53P15975 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp53P15975 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp53P15975 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp53P15975 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21■□□□□ 0.95
Usp53P15975 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp53P15975 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp53P15975 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp53P15975 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp53P15975 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp53P15975 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp53P15975 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.99■□□□□ 0.95
Usp53P15975 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Usp53P15975 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp53P15975 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp53P15975 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.99■□□□□ 0.95
Usp53P15975 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp53P15975 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp53P15975 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.98■□□□□ 0.95
Usp53P15975 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Usp53P15975 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp53P15975 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.98■□□□□ 0.95
Usp53P15975 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp53P15975 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Usp53P15975 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.98■□□□□ 0.95
Usp53P15975 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.98■□□□□ 0.95
Usp53P15975 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp53P15975 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp53P15975 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp53P15975 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp53P15975 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp53P15975 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp53P15975 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp53P15975 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp53P15975 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp53P15975 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.97■□□□□ 0.95
Usp53P15975 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.97■□□□□ 0.95
Usp53P15975 Gm10138-203ENSMUST00000206952 366 ntBASIC20.97■□□□□ 0.95
Usp53P15975 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp53P15975 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Usp53P15975 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
Usp53P15975 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.96■□□□□ 0.95
Usp53P15975 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Usp53P15975 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.96■□□□□ 0.95
Usp53P15975 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.96■□□□□ 0.95
Usp53P15975 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp53P15975 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Usp53P15975 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp53P15975 Gm15375-201ENSMUST00000119510 849 ntBASIC20.95■□□□□ 0.94
Usp53P15975 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.95■□□□□ 0.94
Usp53P15975 Gm42545-201ENSMUST00000202755 922 ntBASIC20.95■□□□□ 0.94
Usp53P15975 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp53P15975 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp53P15975 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp53P15975 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp53P15975 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp53P15975 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp53P15975 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp53P15975 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp53P15975 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp53P15975 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Usp53P15975 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp53P15975 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp53P15975 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.94■□□□□ 0.94
Usp53P15975 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.94■□□□□ 0.94
Usp53P15975 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp53P15975 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Usp53P15975 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp53P15975 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp53P15975 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp53P15975 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp53P15975 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp53P15975 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp53P15975 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp53P15975 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp53P15975 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Usp53P15975 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp53P15975 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms