Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim1P0C8K7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim1P0C8K7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim1P0C8K7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Gm10399-202ENSMUST00000202768 748 ntBASIC12.52□□□□□ -0.41
Smim1P0C8K7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.52□□□□□ -0.41
Smim1P0C8K7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smim1P0C8K7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smim1P0C8K7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.51□□□□□ -0.41
Smim1P0C8K7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim1P0C8K7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.5□□□□□ -0.41
Smim1P0C8K7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Smim1P0C8K7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Gm27045-201ENSMUST00000182145 1402 ntBASIC12.49□□□□□ -0.41
Smim1P0C8K7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.49□□□□□ -0.41
Smim1P0C8K7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.49□□□□□ -0.41
Smim1P0C8K7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.49□□□□□ -0.41
Smim1P0C8K7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.49□□□□□ -0.41
Smim1P0C8K7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smim1P0C8K7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim1P0C8K7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Smim1P0C8K7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim1P0C8K7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim1P0C8K7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smim1P0C8K7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smim1P0C8K7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.48□□□□□ -0.41
Smim1P0C8K7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim1P0C8K7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smim1P0C8K7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms