Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
P04945 Gm27405-201ENSMUST00000184201 112 ntBASIC15.55■□□□□ 0.08
P04945 Gm7291-201ENSMUST00000199147 382 ntBASIC15.55■□□□□ 0.08
P04945 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04945 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04945 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04945 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04945 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04945 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04945 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
P04945 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04945 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
P04945 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
P04945 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.54■□□□□ 0.08
P04945 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
P04945 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
P04945 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.53■□□□□ 0.08
P04945 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04945 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
P04945 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04945 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
P04945 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04945 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
P04945 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04945 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
P04945 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04945 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
P04945 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.53■□□□□ 0.08
P04945 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04945 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
P04945 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
P04945 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04945 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
P04945 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04945 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04945 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04945 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
P04945 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
P04945 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04945 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.52■□□□□ 0.08
P04945 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
P04945 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
P04945 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.52■□□□□ 0.08
P04945 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04945 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
P04945 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
P04945 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04945 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
P04945 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04945 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04945 Gm13148-201ENSMUST00000118892 745 ntBASIC15.51■□□□□ 0.07
P04945 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.51■□□□□ 0.07
P04945 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
P04945 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.51■□□□□ 0.07
P04945 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
P04945 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.51■□□□□ 0.07
P04945 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04945 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04945 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04945 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04945 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04945 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04945 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04945 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04945 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.5■□□□□ 0.07
P04945 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04945 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04945 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
P04945 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.5■□□□□ 0.07
P04945 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.5■□□□□ 0.07
P04945 Gm26524-201ENSMUST00000192339 390 ntBASIC15.5■□□□□ 0.07
P04945 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04945 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04945 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04945 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
P04945 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04945 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04945 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04945 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04945 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
P04945 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.49■□□□□ 0.07
P04945 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
P04945 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.49■□□□□ 0.07
P04945 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04945 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.49■□□□□ 0.07
P04945 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
P04945 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04945 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
P04945 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms