Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Tgfb1P04202 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tgfb1P04202 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tgfb1P04202 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Tgfb1P04202 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.76■□□□□ 0.27
Tgfb1P04202 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.76■□□□□ 0.27
Tgfb1P04202 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.76■□□□□ 0.27
Tgfb1P04202 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.76■□□□□ 0.27
Tgfb1P04202 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Gm6365-201ENSMUST00000054711 744 ntBASIC16.76■□□□□ 0.27
Tgfb1P04202 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Tgfb1P04202 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfb1P04202 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Tgfb1P04202 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfb1P04202 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tgfb1P04202 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfb1P04202 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfb1P04202 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Tgfb1P04202 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfb1P04202 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfb1P04202 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Tgfb1P04202 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfb1P04202 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.75■□□□□ 0.27
Tgfb1P04202 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.75■□□□□ 0.27
Tgfb1P04202 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.75■□□□□ 0.27
Tgfb1P04202 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tgfb1P04202 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfb1P04202 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfb1P04202 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Tgfb1P04202 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfb1P04202 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfb1P04202 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfb1P04202 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.74■□□□□ 0.27
Tgfb1P04202 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfb1P04202 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfb1P04202 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.74■□□□□ 0.27
Tgfb1P04202 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfb1P04202 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfb1P04202 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfb1P04202 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfb1P04202 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.74■□□□□ 0.27
Tgfb1P04202 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.73■□□□□ 0.27
Tgfb1P04202 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfb1P04202 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfb1P04202 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Tgfb1P04202 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfb1P04202 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfb1P04202 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.73■□□□□ 0.27
Tgfb1P04202 Gm7291-201ENSMUST00000199147 382 ntBASIC16.73■□□□□ 0.27
Tgfb1P04202 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfb1P04202 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.73■□□□□ 0.27
Tgfb1P04202 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfb1P04202 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.73■□□□□ 0.27
Tgfb1P04202 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tgfb1P04202 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tgfb1P04202 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tgfb1P04202 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfb1P04202 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfb1P04202 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfb1P04202 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfb1P04202 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfb1P04202 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.72■□□□□ 0.27
Tgfb1P04202 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfb1P04202 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Tgfb1P04202 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfb1P04202 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Tgfb1P04202 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfb1P04202 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.72■□□□□ 0.27
Tgfb1P04202 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfb1P04202 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfb1P04202 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tgfb1P04202 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfb1P04202 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfb1P04202 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfb1P04202 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfb1P04202 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfb1P04202 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfb1P04202 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfb1P04202 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfb1P04202 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tgfb1P04202 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfb1P04202 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfb1P04202 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfb1P04202 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Tgfb1P04202 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfb1P04202 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfb1P04202 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms