Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.55■□□□□ 0.24
P01852 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.55■□□□□ 0.24
P01852 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.55■□□□□ 0.24
P01852 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.55■□□□□ 0.24
P01852 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.55■□□□□ 0.24
P01852 Gm44549-201ENSMUST00000208351 577 ntBASIC16.55■□□□□ 0.24
P01852 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.55■□□□□ 0.24
P01852 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.55■□□□□ 0.24
P01852 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.55■□□□□ 0.24
P01852 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.55■□□□□ 0.24
P01852 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.55■□□□□ 0.24
P01852 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
P01852 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 Gm22325-201ENSMUST00000158904 308 ntBASIC16.54■□□□□ 0.24
P01852 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.54■□□□□ 0.24
P01852 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
P01852 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
P01852 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.53■□□□□ 0.24
P01852 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
P01852 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.53■□□□□ 0.24
P01852 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
P01852 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.53■□□□□ 0.24
P01852 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.53■□□□□ 0.24
P01852 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01852 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
P01852 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
P01852 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P01852 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
P01852 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01852 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01852 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01852 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
P01852 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01852 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01852 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
P01852 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P01852 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.52■□□□□ 0.24
P01852 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01852 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.52■□□□□ 0.24
P01852 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P01852 Gm20049-201ENSMUST00000219950 730 ntBASIC16.52■□□□□ 0.24
P01852 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01852 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
P01852 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
P01852 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
P01852 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
P01852 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
P01852 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
P01852 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.52■□□□□ 0.23
P01852 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
P01852 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.51■□□□□ 0.23
P01852 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
P01852 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.51■□□□□ 0.23
P01852 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.51■□□□□ 0.23
P01852 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.51■□□□□ 0.23
P01852 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01852 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms