Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TcraP01849 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TcraP01849 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.25□□□□□ -0.29
TcraP01849 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TcraP01849 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TcraP01849 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TcraP01849 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.25□□□□□ -0.29
TcraP01849 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TcraP01849 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TcraP01849 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TcraP01849 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.25□□□□□ -0.29
TcraP01849 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.25□□□□□ -0.29
TcraP01849 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.25□□□□□ -0.29
TcraP01849 Gm45102-201ENSMUST00000207427 857 ntBASIC13.25□□□□□ -0.29
TcraP01849 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TcraP01849 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TcraP01849 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TcraP01849 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TcraP01849 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TcraP01849 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TcraP01849 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TcraP01849 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.24□□□□□ -0.29
TcraP01849 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TcraP01849 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.24□□□□□ -0.29
TcraP01849 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.24□□□□□ -0.29
TcraP01849 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TcraP01849 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
TcraP01849 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
TcraP01849 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TcraP01849 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
TcraP01849 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TcraP01849 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TcraP01849 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TcraP01849 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.23□□□□□ -0.29
TcraP01849 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TcraP01849 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.23□□□□□ -0.29
TcraP01849 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TcraP01849 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TcraP01849 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TcraP01849 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TcraP01849 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TcraP01849 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TcraP01849 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.22□□□□□ -0.29
TcraP01849 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TcraP01849 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.22□□□□□ -0.29
TcraP01849 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TcraP01849 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TcraP01849 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TcraP01849 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TcraP01849 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.22□□□□□ -0.29
TcraP01849 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TcraP01849 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TcraP01849 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.21□□□□□ -0.29
TcraP01849 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms