Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vti1aO89116 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.56■□□□□ 0.72
Vti1aO89116 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.56■□□□□ 0.72
Vti1aO89116 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Vti1aO89116 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vti1aO89116 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vti1aO89116 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vti1aO89116 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Vti1aO89116 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vti1aO89116 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.55■□□□□ 0.72
Vti1aO89116 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.55■□□□□ 0.72
Vti1aO89116 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.55■□□□□ 0.72
Vti1aO89116 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vti1aO89116 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vti1aO89116 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vti1aO89116 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vti1aO89116 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vti1aO89116 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vti1aO89116 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vti1aO89116 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.54■□□□□ 0.72
Vti1aO89116 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vti1aO89116 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vti1aO89116 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vti1aO89116 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.54■□□□□ 0.72
Vti1aO89116 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vti1aO89116 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vti1aO89116 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vti1aO89116 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.53■□□□□ 0.72
Vti1aO89116 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Vti1aO89116 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.53■□□□□ 0.72
Vti1aO89116 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.53■□□□□ 0.72
Vti1aO89116 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vti1aO89116 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vti1aO89116 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vti1aO89116 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Vti1aO89116 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Vti1aO89116 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vti1aO89116 Gm715-201ENSMUST00000117865 831 ntBASIC19.52■□□□□ 0.72
Vti1aO89116 Gm13158-201ENSMUST00000122007 736 ntBASIC19.52■□□□□ 0.72
Vti1aO89116 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Vti1aO89116 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.52■□□□□ 0.72
Vti1aO89116 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vti1aO89116 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Vti1aO89116 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vti1aO89116 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vti1aO89116 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Vti1aO89116 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Vti1aO89116 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.52■□□□□ 0.71
Vti1aO89116 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vti1aO89116 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Vti1aO89116 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.51■□□□□ 0.71
Vti1aO89116 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Gm13836-201ENSMUST00000121159 501 ntBASIC19.51■□□□□ 0.71
Vti1aO89116 Gm10698-201ENSMUST00000182663 604 ntBASIC19.51■□□□□ 0.71
Vti1aO89116 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.51■□□□□ 0.71
Vti1aO89116 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vti1aO89116 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Vti1aO89116 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vti1aO89116 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vti1aO89116 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Vti1aO89116 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vti1aO89116 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vti1aO89116 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vti1aO89116 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.5■□□□□ 0.71
Vti1aO89116 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vti1aO89116 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vti1aO89116 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vti1aO89116 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vti1aO89116 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vti1aO89116 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vti1aO89116 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.49■□□□□ 0.71
Vti1aO89116 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vti1aO89116 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Vti1aO89116 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vti1aO89116 Gm7977-201ENSMUST00000193787 748 ntBASIC19.49■□□□□ 0.71
Vti1aO89116 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.49■□□□□ 0.71
Vti1aO89116 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms