Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn4O89029 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.13■□□□□ 0.33
Matn4O89029 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Matn4O89029 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Matn4O89029 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.13■□□□□ 0.33
Matn4O89029 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Matn4O89029 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Matn4O89029 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Matn4O89029 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Matn4O89029 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn4O89029 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Matn4O89029 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn4O89029 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Matn4O89029 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Matn4O89029 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.12■□□□□ 0.33
Matn4O89029 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Matn4O89029 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.12■□□□□ 0.33
Matn4O89029 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.12■□□□□ 0.33
Matn4O89029 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn4O89029 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Matn4O89029 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn4O89029 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn4O89029 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Matn4O89029 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn4O89029 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn4O89029 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn4O89029 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.11■□□□□ 0.33
Matn4O89029 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.11■□□□□ 0.33
Matn4O89029 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Matn4O89029 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Matn4O89029 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Matn4O89029 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Matn4O89029 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Matn4O89029 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Matn4O89029 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Matn4O89029 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Matn4O89029 Gm9988-201ENSMUST00000069786 435 ntBASIC17.11■□□□□ 0.33
Matn4O89029 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Matn4O89029 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Matn4O89029 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Matn4O89029 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Matn4O89029 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Matn4O89029 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Matn4O89029 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.1■□□□□ 0.33
Matn4O89029 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.1■□□□□ 0.33
Matn4O89029 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.1■□□□□ 0.33
Matn4O89029 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Matn4O89029 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn4O89029 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Matn4O89029 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Matn4O89029 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Matn4O89029 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Matn4O89029 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Matn4O89029 Gm22325-201ENSMUST00000158904 308 ntBASIC17.09■□□□□ 0.33
Matn4O89029 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Matn4O89029 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Matn4O89029 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Matn4O89029 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Matn4O89029 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Matn4O89029 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Matn4O89029 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Matn4O89029 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Matn4O89029 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Matn4O89029 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Matn4O89029 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Matn4O89029 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Matn4O89029 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.08■□□□□ 0.32
Matn4O89029 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Matn4O89029 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.08■□□□□ 0.32
Matn4O89029 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Matn4O89029 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn4O89029 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn4O89029 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn4O89029 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn4O89029 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn4O89029 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms