Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syn1O88935 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.67■□□□□ 0.58
Syn1O88935 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.67■□□□□ 0.58
Syn1O88935 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syn1O88935 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syn1O88935 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syn1O88935 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syn1O88935 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syn1O88935 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syn1O88935 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Syn1O88935 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.66■□□□□ 0.58
Syn1O88935 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Syn1O88935 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syn1O88935 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Gm12085-201ENSMUST00000119263 940 ntBASIC18.65■□□□□ 0.58
Syn1O88935 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Gm17807-201ENSMUST00000186869 298 ntBASIC18.65■□□□□ 0.58
Syn1O88935 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.65■□□□□ 0.58
Syn1O88935 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syn1O88935 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.65■□□□□ 0.58
Syn1O88935 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Syn1O88935 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Syn1O88935 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syn1O88935 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syn1O88935 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.64■□□□□ 0.57
Syn1O88935 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.64■□□□□ 0.57
Syn1O88935 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Syn1O88935 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Syn1O88935 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Syn1O88935 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syn1O88935 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syn1O88935 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.64■□□□□ 0.57
Syn1O88935 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Syn1O88935 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Syn1O88935 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syn1O88935 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syn1O88935 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syn1O88935 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.63■□□□□ 0.57
Syn1O88935 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syn1O88935 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Syn1O88935 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.63■□□□□ 0.57
Syn1O88935 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Syn1O88935 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Syn1O88935 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Syn1O88935 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syn1O88935 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Syn1O88935 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Syn1O88935 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Syn1O88935 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Syn1O88935 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syn1O88935 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.62■□□□□ 0.57
Syn1O88935 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Syn1O88935 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syn1O88935 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syn1O88935 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.62■□□□□ 0.57
Syn1O88935 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syn1O88935 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.62■□□□□ 0.57
Syn1O88935 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syn1O88935 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syn1O88935 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Syn1O88935 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Syn1O88935 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Syn1O88935 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Syn1O88935 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Syn1O88935 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.61■□□□□ 0.57
Syn1O88935 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.61■□□□□ 0.57
Syn1O88935 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Syn1O88935 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Syn1O88935 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Syn1O88935 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Syn1O88935 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syn1O88935 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syn1O88935 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Syn1O88935 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syn1O88935 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Syn1O88935 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syn1O88935 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms