Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Capns1O88456 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.72■□□□□ 0.27
Capns1O88456 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.72■□□□□ 0.27
Capns1O88456 Gm18671-201ENSMUST00000214826 683 ntBASIC16.72■□□□□ 0.27
Capns1O88456 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Capns1O88456 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Capns1O88456 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Capns1O88456 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Capns1O88456 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Capns1O88456 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.71■□□□□ 0.27
Capns1O88456 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Capns1O88456 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.71■□□□□ 0.27
Capns1O88456 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Capns1O88456 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Capns1O88456 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Capns1O88456 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Capns1O88456 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.7■□□□□ 0.26
Capns1O88456 Smad6-203ENSMUST00000179458 273 ntBASIC16.7■□□□□ 0.26
Capns1O88456 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.7■□□□□ 0.26
Capns1O88456 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.7■□□□□ 0.26
Capns1O88456 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Capns1O88456 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Capns1O88456 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.7■□□□□ 0.26
Capns1O88456 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Capns1O88456 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Capns1O88456 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Capns1O88456 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Capns1O88456 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.69■□□□□ 0.26
Capns1O88456 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Capns1O88456 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Capns1O88456 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Capns1O88456 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Capns1O88456 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Capns1O88456 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Capns1O88456 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Capns1O88456 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.69■□□□□ 0.26
Capns1O88456 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Capns1O88456 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Capns1O88456 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Capns1O88456 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Capns1O88456 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.69■□□□□ 0.26
Capns1O88456 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Capns1O88456 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.69■□□□□ 0.26
Capns1O88456 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Capns1O88456 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms