Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.75■□□□□ 0.43
Cdh16O88338 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Cdh16O88338 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cdh16O88338 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh16O88338 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cdh16O88338 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.74■□□□□ 0.43
Cdh16O88338 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cdh16O88338 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Cdh16O88338 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cdh16O88338 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Cdh16O88338 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cdh16O88338 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh16O88338 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdh16O88338 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.73■□□□□ 0.43
Cdh16O88338 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdh16O88338 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.73■□□□□ 0.43
Cdh16O88338 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh16O88338 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cdh16O88338 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.72■□□□□ 0.43
Cdh16O88338 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Cdh16O88338 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.72■□□□□ 0.43
Cdh16O88338 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cdh16O88338 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh16O88338 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cdh16O88338 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cdh16O88338 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cdh16O88338 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cdh16O88338 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cdh16O88338 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cdh16O88338 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cdh16O88338 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh16O88338 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdh16O88338 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdh16O88338 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdh16O88338 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cdh16O88338 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Cdh16O88338 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms