Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10139O88245 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10139O88245 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC11.06□□□□□ -0.64
Gm10139O88245 Gm43672-201ENSMUST00000199072 1731 ntBASIC11.06□□□□□ -0.64
Gm10139O88245 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Gm10139O88245 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC11.06□□□□□ -0.64
Gm10139O88245 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm10139O88245 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm10139O88245 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Gm10139O88245 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm10139O88245 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gm10139O88245 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm10139O88245 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Gm10139O88245 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm10139O88245 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm10139O88245 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC11.05□□□□□ -0.64
Gm10139O88245 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.05□□□□□ -0.64
Gm10139O88245 Zcchc6-207ENSMUST00000225576 2499 ntBASIC11.05□□□□□ -0.64
Gm10139O88245 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm10139O88245 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm10139O88245 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm10139O88245 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Gm10139O88245 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gm10139O88245 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm10139O88245 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
Gm10139O88245 Gm37374-201ENSMUST00000194954 1829 ntBASIC11.05□□□□□ -0.64
Gm10139O88245 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm10139O88245 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Gm10139O88245 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Gm10139O88245 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC11.04□□□□□ -0.64
Gm10139O88245 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Gm10139O88245 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm10139O88245 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Gm10139O88245 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC11.04□□□□□ -0.64
Gm10139O88245 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm10139O88245 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm10139O88245 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm10139O88245 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm10139O88245 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm10139O88245 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Gm10139O88245 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gm10139O88245 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm10139O88245 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10139O88245 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10139O88245 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10139O88245 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10139O88245 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10139O88245 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10139O88245 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10139O88245 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10139O88245 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm10139O88245 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gm10139O88245 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gm10139O88245 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.02□□□□□ -0.65
Gm10139O88245 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Gm10139O88245 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm10139O88245 Gm19439-201ENSMUST00000198195 2273 ntBASIC11.02□□□□□ -0.65
Gm10139O88245 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms