Protein–RNA interactions for Protein: O70507

Hcn4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, mousemouse

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn4O70507 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.18■□□□□ 0.66
Hcn4O70507 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn4O70507 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Hcn4O70507 Gm27463-201ENSMUST00000183569 57 ntBASIC19.18■□□□□ 0.66
Hcn4O70507 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn4O70507 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn4O70507 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn4O70507 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn4O70507 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.18■□□□□ 0.66
Hcn4O70507 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn4O70507 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcn4O70507 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.17■□□□□ 0.66
Hcn4O70507 Gm7063-201ENSMUST00000186840 981 ntBASIC19.17■□□□□ 0.66
Hcn4O70507 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.17■□□□□ 0.66
Hcn4O70507 Gm37935-201ENSMUST00000192012 982 ntBASIC19.17■□□□□ 0.66
Hcn4O70507 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hcn4O70507 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Hcn4O70507 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcn4O70507 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.16■□□□□ 0.66
Hcn4O70507 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hcn4O70507 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hcn4O70507 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 AW822252-206ENSMUST00000208904 237 ntBASIC19.16■□□□□ 0.66
Hcn4O70507 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.16■□□□□ 0.66
Hcn4O70507 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Hcn4O70507 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn4O70507 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.16■□□□□ 0.66
Hcn4O70507 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.15■□□□□ 0.66
Hcn4O70507 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.15■□□□□ 0.66
Hcn4O70507 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn4O70507 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn4O70507 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.15■□□□□ 0.66
Hcn4O70507 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn4O70507 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hcn4O70507 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn4O70507 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn4O70507 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn4O70507 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn4O70507 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hcn4O70507 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hcn4O70507 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn4O70507 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn4O70507 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Hcn4O70507 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hcn4O70507 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn4O70507 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn4O70507 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
Hcn4O70507 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn4O70507 Gm2274-201ENSMUST00000184539 609 ntBASIC19.14■□□□□ 0.65
Hcn4O70507 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn4O70507 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Hcn4O70507 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn4O70507 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Hcn4O70507 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn4O70507 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Hcn4O70507 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn4O70507 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn4O70507 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn4O70507 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn4O70507 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn4O70507 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn4O70507 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.13■□□□□ 0.65
Hcn4O70507 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn4O70507 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.13■□□□□ 0.65
Hcn4O70507 Gm10138-203ENSMUST00000206952 366 ntBASIC19.13■□□□□ 0.65
Hcn4O70507 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.13■□□□□ 0.65
Hcn4O70507 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn4O70507 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn4O70507 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn4O70507 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn4O70507 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn4O70507 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn4O70507 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn4O70507 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Hcn4O70507 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn4O70507 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.12■□□□□ 0.65
Hcn4O70507 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn4O70507 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms