Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Mmp8O70138 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC22.18■■□□□ 1.14
Mmp8O70138 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.18■■□□□ 1.14
Mmp8O70138 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Mmp8O70138 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Gm37856-201ENSMUST00000191634 999 ntBASIC22.18■■□□□ 1.14
Mmp8O70138 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Mmp8O70138 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Mmp8O70138 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Mmp8O70138 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Mmp8O70138 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Mmp8O70138 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Mmp8O70138 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Mmp8O70138 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC22.17■■□□□ 1.14
Mmp8O70138 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Mmp8O70138 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.17■■□□□ 1.14
Mmp8O70138 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Mmp8O70138 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Mmp8O70138 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Mmp8O70138 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Mmp8O70138 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC22.17■■□□□ 1.14
Mmp8O70138 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Mmp8O70138 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Mmp8O70138 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Mmp8O70138 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Mmp8O70138 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Mmp8O70138 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Mmp8O70138 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Mmp8O70138 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Mmp8O70138 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Mmp8O70138 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Mmp8O70138 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Mmp8O70138 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Mmp8O70138 Mtag2-201ENSMUST00000058665 714 ntBASIC22.16■■□□□ 1.14
Mmp8O70138 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Mmp8O70138 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Mmp8O70138 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Mmp8O70138 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Mmp8O70138 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Mmp8O70138 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Mmp8O70138 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Mmp8O70138 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Mmp8O70138 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Mmp8O70138 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Mmp8O70138 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Mmp8O70138 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Mmp8O70138 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Mmp8O70138 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.14■■□□□ 1.14
Mmp8O70138 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Mmp8O70138 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Mmp8O70138 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Mmp8O70138 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Mmp8O70138 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Mmp8O70138 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Mmp8O70138 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC22.14■■□□□ 1.13
Mmp8O70138 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
Mmp8O70138 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Mmp8O70138 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp8O70138 Grk6-206ENSMUST00000224995 2971 ntBASIC22.13■■□□□ 1.13
Mmp8O70138 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Mmp8O70138 Gm10653-202ENSMUST00000139570 835 ntBASIC22.13■■□□□ 1.13
Mmp8O70138 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.13■■□□□ 1.13
Mmp8O70138 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp8O70138 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp8O70138 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp8O70138 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp8O70138 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp8O70138 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC22.12■■□□□ 1.13
Mmp8O70138 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp8O70138 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp8O70138 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp8O70138 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.12■■□□□ 1.13
Mmp8O70138 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp8O70138 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp8O70138 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp8O70138 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp8O70138 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp8O70138 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Mmp8O70138 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Mmp8O70138 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Mmp8O70138 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC22.11■■□□□ 1.13
Mmp8O70138 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Mmp8O70138 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Mmp8O70138 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Mmp8O70138 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC22.11■■□□□ 1.13
Mmp8O70138 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Mmp8O70138 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Mmp8O70138 Gm37374-201ENSMUST00000194954 1829 ntBASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms