Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.34■□□□□ 0.05
Cxcl13O55038 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl13O55038 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl13O55038 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cxcl13O55038 Mir6349-201ENSMUST00000184059 97 ntBASIC15.34■□□□□ 0.05
Cxcl13O55038 Gm43183-201ENSMUST00000200632 547 ntBASIC15.34■□□□□ 0.05
Cxcl13O55038 Gm42545-201ENSMUST00000202755 922 ntBASIC15.34■□□□□ 0.05
Cxcl13O55038 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl13O55038 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl13O55038 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl13O55038 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl13O55038 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl13O55038 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cxcl13O55038 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.34■□□□□ 0.05
Cxcl13O55038 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl13O55038 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Cxcl13O55038 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.33■□□□□ 0.04
Cxcl13O55038 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.33■□□□□ 0.04
Cxcl13O55038 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.33■□□□□ 0.04
Cxcl13O55038 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cxcl13O55038 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl13O55038 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl13O55038 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl13O55038 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl13O55038 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl13O55038 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.33■□□□□ 0.04
Cxcl13O55038 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl13O55038 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cxcl13O55038 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl13O55038 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl13O55038 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cxcl13O55038 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.32■□□□□ 0.04
Cxcl13O55038 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cxcl13O55038 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.32■□□□□ 0.04
Cxcl13O55038 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Cxcl13O55038 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.32■□□□□ 0.04
Cxcl13O55038 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.32■□□□□ 0.04
Cxcl13O55038 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cxcl13O55038 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cxcl13O55038 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cxcl13O55038 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.31■□□□□ 0.04
Cxcl13O55038 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl13O55038 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl13O55038 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl13O55038 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Cxcl13O55038 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl13O55038 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.31■□□□□ 0.04
Cxcl13O55038 Gm37055-201ENSMUST00000191866 133 ntBASIC15.31■□□□□ 0.04
Cxcl13O55038 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl13O55038 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.31■□□□□ 0.04
Cxcl13O55038 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl13O55038 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.31■□□□□ 0.04
Cxcl13O55038 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl13O55038 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl13O55038 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl13O55038 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl13O55038 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcl13O55038 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cxcl13O55038 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.3■□□□□ 0.04
Cxcl13O55038 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.3■□□□□ 0.04
Cxcl13O55038 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.3■□□□□ 0.04
Cxcl13O55038 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cxcl13O55038 Gm37292-201ENSMUST00000192062 758 ntBASIC15.3■□□□□ 0.04
Cxcl13O55038 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.3■□□□□ 0.04
Cxcl13O55038 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.3■□□□□ 0.04
Cxcl13O55038 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.3■□□□□ 0.04
Cxcl13O55038 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.3■□□□□ 0.04
Cxcl13O55038 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cxcl13O55038 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcl13O55038 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cxcl13O55038 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcl13O55038 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms