Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cacna1bO55017 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1bO55017 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1bO55017 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1bO55017 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cacna1bO55017 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1bO55017 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cacna1bO55017 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1bO55017 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1bO55017 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1bO55017 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cacna1bO55017 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1bO55017 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1bO55017 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.47■□□□□ 0.39
Cacna1bO55017 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1bO55017 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1bO55017 Gm14859-201ENSMUST00000117752 357 ntBASIC17.47■□□□□ 0.39
Cacna1bO55017 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cacna1bO55017 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cacna1bO55017 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1bO55017 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1bO55017 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cacna1bO55017 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cacna1bO55017 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1bO55017 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1bO55017 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1bO55017 Gm9103-201ENSMUST00000119371 405 ntBASIC17.47■□□□□ 0.39
Cacna1bO55017 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1bO55017 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.47■□□□□ 0.39
Cacna1bO55017 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1bO55017 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1bO55017 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cacna1bO55017 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.46■□□□□ 0.39
Cacna1bO55017 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1bO55017 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1bO55017 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1bO55017 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.46■□□□□ 0.39
Cacna1bO55017 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.46■□□□□ 0.39
Cacna1bO55017 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1bO55017 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1bO55017 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cacna1bO55017 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1bO55017 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1bO55017 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cacna1bO55017 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cacna1bO55017 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1bO55017 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cacna1bO55017 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Cacna1bO55017 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cacna1bO55017 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cacna1bO55017 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.45■□□□□ 0.38
Cacna1bO55017 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.45■□□□□ 0.38
Cacna1bO55017 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
Cacna1bO55017 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cacna1bO55017 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cacna1bO55017 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1bO55017 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1bO55017 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cacna1bO55017 Gm27463-201ENSMUST00000183569 57 ntBASIC17.44■□□□□ 0.38
Cacna1bO55017 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1bO55017 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1bO55017 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1bO55017 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1bO55017 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1bO55017 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1bO55017 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1bO55017 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1bO55017 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1bO55017 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1bO55017 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1bO55017 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1bO55017 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.43■□□□□ 0.38
Cacna1bO55017 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1bO55017 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Cacna1bO55017 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1bO55017 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1bO55017 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1bO55017 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1bO55017 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1bO55017 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.42■□□□□ 0.38
Cacna1bO55017 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1bO55017 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.42■□□□□ 0.38
Cacna1bO55017 Gm38285-201ENSMUST00000192928 922 ntBASIC17.42■□□□□ 0.38
Cacna1bO55017 Gm5587-201ENSMUST00000206270 674 ntBASIC17.42■□□□□ 0.38
Cacna1bO55017 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1bO55017 Gm7461-201ENSMUST00000058918 827 ntBASIC17.42■□□□□ 0.38
Cacna1bO55017 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1bO55017 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1bO55017 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms