Protein–RNA interactions for Protein: O55013

Trappc3, Trafficking protein particle complex subunit 3, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc3O55013 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.47■□□□□ 0.71
Trappc3O55013 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc3O55013 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc3O55013 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc3O55013 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc3O55013 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.47■□□□□ 0.71
Trappc3O55013 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc3O55013 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc3O55013 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trappc3O55013 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trappc3O55013 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Trappc3O55013 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc3O55013 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc3O55013 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc3O55013 Gm20760-201ENSMUST00000179197 648 ntBASIC19.46■□□□□ 0.71
Trappc3O55013 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc3O55013 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trappc3O55013 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc3O55013 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc3O55013 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc3O55013 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Trappc3O55013 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trappc3O55013 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
Trappc3O55013 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.45■□□□□ 0.7
Trappc3O55013 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc3O55013 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc3O55013 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.45■□□□□ 0.7
Trappc3O55013 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc3O55013 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc3O55013 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trappc3O55013 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trappc3O55013 Gm12527-201ENSMUST00000117967 564 ntBASIC19.45■□□□□ 0.7
Trappc3O55013 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc3O55013 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc3O55013 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc3O55013 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc3O55013 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc3O55013 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.44■□□□□ 0.7
Trappc3O55013 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc3O55013 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc3O55013 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc3O55013 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc3O55013 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.44■□□□□ 0.7
Trappc3O55013 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc3O55013 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc3O55013 Gm44549-201ENSMUST00000208351 577 ntBASIC19.44■□□□□ 0.7
Trappc3O55013 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.44■□□□□ 0.7
Trappc3O55013 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc3O55013 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc3O55013 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.43■□□□□ 0.7
Trappc3O55013 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc3O55013 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc3O55013 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc3O55013 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trappc3O55013 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trappc3O55013 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc3O55013 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc3O55013 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc3O55013 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc3O55013 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.43■□□□□ 0.7
Trappc3O55013 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc3O55013 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc3O55013 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc3O55013 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc3O55013 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc3O55013 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc3O55013 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trappc3O55013 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.42■□□□□ 0.7
Trappc3O55013 Gm10653-202ENSMUST00000139570 835 ntBASIC19.42■□□□□ 0.7
Trappc3O55013 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Trappc3O55013 Gm2559-201ENSMUST00000201323 363 ntBASIC19.42■□□□□ 0.7
Trappc3O55013 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc3O55013 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc3O55013 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.42■□□□□ 0.7
Trappc3O55013 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trappc3O55013 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc3O55013 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc3O55013 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc3O55013 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc3O55013 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc3O55013 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc3O55013 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trappc3O55013 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc3O55013 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trappc3O55013 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc3O55013 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trappc3O55013 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc3O55013 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc3O55013 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc3O55013 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc3O55013 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trappc3O55013 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc3O55013 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc3O55013 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.41■□□□□ 0.7
Trappc3O55013 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc3O55013 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trappc3O55013 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trappc3O55013 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.4■□□□□ 0.7
Trappc3O55013 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trappc3O55013 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms