Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn5O54942 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cldn5O54942 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cldn5O54942 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cldn5O54942 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn5O54942 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cldn5O54942 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn5O54942 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cldn5O54942 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn5O54942 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn5O54942 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Cldn5O54942 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn5O54942 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cldn5O54942 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn5O54942 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn5O54942 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn5O54942 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn5O54942 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.82■□□□□ 0.6
Cldn5O54942 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn5O54942 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cldn5O54942 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn5O54942 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cldn5O54942 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cldn5O54942 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cldn5O54942 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn5O54942 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cldn5O54942 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Cldn5O54942 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 Gm15378-201ENSMUST00000121894 207 ntBASIC18.81■□□□□ 0.6
Cldn5O54942 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Cldn5O54942 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn5O54942 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.8■□□□□ 0.6
Cldn5O54942 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.8■□□□□ 0.6
Cldn5O54942 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Cldn5O54942 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.8■□□□□ 0.6
Cldn5O54942 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn5O54942 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.8■□□□□ 0.6
Cldn5O54942 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn5O54942 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn5O54942 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn5O54942 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn5O54942 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Cldn5O54942 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.8■□□□□ 0.6
Cldn5O54942 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn5O54942 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Cldn5O54942 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn5O54942 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn5O54942 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn5O54942 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn5O54942 Gm10138-203ENSMUST00000206952 366 ntBASIC18.79■□□□□ 0.6
Cldn5O54942 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn5O54942 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn5O54942 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cldn5O54942 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn5O54942 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cldn5O54942 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.78■□□□□ 0.6
Cldn5O54942 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cldn5O54942 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cldn5O54942 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn5O54942 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn5O54942 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn5O54942 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.78■□□□□ 0.6
Cldn5O54942 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cldn5O54942 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.78■□□□□ 0.6
Cldn5O54942 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn5O54942 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn5O54942 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn5O54942 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn5O54942 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.78■□□□□ 0.6
Cldn5O54942 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn5O54942 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn5O54942 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn5O54942 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.77■□□□□ 0.6
Cldn5O54942 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn5O54942 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn5O54942 Tgds-204ENSMUST00000228543 1594 ntBASIC18.77■□□□□ 0.6
Cldn5O54942 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn5O54942 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cldn5O54942 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn5O54942 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Cldn5O54942 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn5O54942 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn5O54942 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn5O54942 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.77■□□□□ 0.6
Cldn5O54942 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn5O54942 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cldn5O54942 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn5O54942 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn5O54942 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn5O54942 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms