Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.46■□□□□ 0.23
Matn3O35701 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
Matn3O35701 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Matn3O35701 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Matn3O35701 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Matn3O35701 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Matn3O35701 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Matn3O35701 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.45■□□□□ 0.22
Matn3O35701 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Matn3O35701 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.45■□□□□ 0.22
Matn3O35701 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.45■□□□□ 0.22
Matn3O35701 Golgb1-201ENSMUST00000023534 498 ntBASIC16.45■□□□□ 0.22
Matn3O35701 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Matn3O35701 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.44■□□□□ 0.22
Matn3O35701 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.44■□□□□ 0.22
Matn3O35701 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.44■□□□□ 0.22
Matn3O35701 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Matn3O35701 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Matn3O35701 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Matn3O35701 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Matn3O35701 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.43■□□□□ 0.22
Matn3O35701 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Matn3O35701 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Matn3O35701 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Matn3O35701 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Matn3O35701 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.43■□□□□ 0.22
Matn3O35701 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.43■□□□□ 0.22
Matn3O35701 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Matn3O35701 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.43■□□□□ 0.22
Matn3O35701 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Matn3O35701 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Matn3O35701 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.43■□□□□ 0.22
Matn3O35701 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Matn3O35701 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Matn3O35701 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.43■□□□□ 0.22
Matn3O35701 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Matn3O35701 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Matn3O35701 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.42■□□□□ 0.22
Matn3O35701 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Matn3O35701 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Matn3O35701 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Matn3O35701 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Matn3O35701 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Matn3O35701 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Matn3O35701 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Matn3O35701 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Matn3O35701 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Matn3O35701 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Matn3O35701 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Matn3O35701 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Matn3O35701 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Matn3O35701 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.41■□□□□ 0.22
Matn3O35701 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Matn3O35701 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.41■□□□□ 0.22
Matn3O35701 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Matn3O35701 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Matn3O35701 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms