Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col15a1O35206 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col15a1O35206 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col15a1O35206 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col15a1O35206 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col15a1O35206 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Col15a1O35206 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col15a1O35206 Gm10013-201ENSMUST00000106074 672 ntBASIC23.37■■□□□ 1.33
Col15a1O35206 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC23.37■■□□□ 1.33
Col15a1O35206 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col15a1O35206 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col15a1O35206 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col15a1O35206 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col15a1O35206 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col15a1O35206 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Col15a1O35206 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
Col15a1O35206 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col15a1O35206 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col15a1O35206 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col15a1O35206 Gm6728-201ENSMUST00000178117 1065 ntBASIC23.36■■□□□ 1.33
Col15a1O35206 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC23.36■■□□□ 1.33
Col15a1O35206 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Col15a1O35206 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col15a1O35206 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col15a1O35206 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col15a1O35206 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col15a1O35206 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col15a1O35206 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col15a1O35206 AC108858.1-201ENSMUST00000228461 1498 ntBASIC23.35■■□□□ 1.33
Col15a1O35206 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Col15a1O35206 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Col15a1O35206 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col15a1O35206 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Col15a1O35206 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col15a1O35206 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col15a1O35206 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col15a1O35206 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col15a1O35206 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col15a1O35206 Gm4217-201ENSMUST00000182243 1002 ntBASIC23.34■■□□□ 1.33
Col15a1O35206 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Col15a1O35206 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC23.34■■□□□ 1.33
Col15a1O35206 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col15a1O35206 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col15a1O35206 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col15a1O35206 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Col15a1O35206 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col15a1O35206 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col15a1O35206 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Col15a1O35206 AA414768-201ENSMUST00000121924 1257 ntBASIC23.33■■□□□ 1.33
Col15a1O35206 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col15a1O35206 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col15a1O35206 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col15a1O35206 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col15a1O35206 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Col15a1O35206 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col15a1O35206 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
Col15a1O35206 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col15a1O35206 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col15a1O35206 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Col15a1O35206 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Col15a1O35206 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Col15a1O35206 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col15a1O35206 Gm9194-201ENSMUST00000220749 1447 ntBASIC23.32■■□□□ 1.32
Col15a1O35206 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Col15a1O35206 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col15a1O35206 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Col15a1O35206 AC121961.1-201ENSMUST00000218594 1779 ntBASIC23.32■■□□□ 1.32
Col15a1O35206 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col15a1O35206 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col15a1O35206 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col15a1O35206 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
Col15a1O35206 Mir5130-201ENSMUST00000175160 84 ntBASIC23.31■■□□□ 1.32
Col15a1O35206 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col15a1O35206 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col15a1O35206 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col15a1O35206 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col15a1O35206 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Col15a1O35206 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col15a1O35206 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col15a1O35206 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col15a1O35206 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col15a1O35206 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Col15a1O35206 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col15a1O35206 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col15a1O35206 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col15a1O35206 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col15a1O35206 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.3■■□□□ 1.32
Col15a1O35206 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col15a1O35206 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col15a1O35206 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Col15a1O35206 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC23.29■■□□□ 1.32
Col15a1O35206 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col15a1O35206 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC23.29■■□□□ 1.32
Col15a1O35206 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Col15a1O35206 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
Col15a1O35206 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col15a1O35206 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col15a1O35206 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col15a1O35206 Gm45906-201ENSMUST00000208911 1430 ntBASIC23.29■■□□□ 1.32
Col15a1O35206 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms