Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Alx4O35137 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.17■□□□□ 0.18
Alx4O35137 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.17■□□□□ 0.18
Alx4O35137 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Alx4O35137 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx4O35137 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx4O35137 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.16■□□□□ 0.18
Alx4O35137 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx4O35137 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx4O35137 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx4O35137 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Alx4O35137 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx4O35137 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx4O35137 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx4O35137 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.16■□□□□ 0.18
Alx4O35137 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Alx4O35137 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx4O35137 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Alx4O35137 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.16■□□□□ 0.18
Alx4O35137 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Alx4O35137 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Alx4O35137 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Alx4O35137 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Alx4O35137 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Alx4O35137 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Alx4O35137 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Alx4O35137 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.15■□□□□ 0.18
Alx4O35137 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Alx4O35137 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Gm13534-201ENSMUST00000121169 513 ntBASIC16.14■□□□□ 0.17
Alx4O35137 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Alx4O35137 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
Alx4O35137 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Alx4O35137 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.14■□□□□ 0.17
Alx4O35137 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Alx4O35137 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.13■□□□□ 0.17
Alx4O35137 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Alx4O35137 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.13■□□□□ 0.17
Alx4O35137 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Gm22325-201ENSMUST00000158904 308 ntBASIC16.13■□□□□ 0.17
Alx4O35137 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Alx4O35137 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Alx4O35137 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Alx4O35137 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx4O35137 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx4O35137 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.12■□□□□ 0.17
Alx4O35137 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx4O35137 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx4O35137 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Alx4O35137 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Alx4O35137 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms