Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.66■□□□□ 0.1
Gfra3O35118 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Gfra3O35118 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gfra3O35118 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.66■□□□□ 0.1
Gfra3O35118 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gfra3O35118 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Gfra3O35118 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Gfra3O35118 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Gfra3O35118 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.66■□□□□ 0.1
Gfra3O35118 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gfra3O35118 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gfra3O35118 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gfra3O35118 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gfra3O35118 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gfra3O35118 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gfra3O35118 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.65■□□□□ 0.1
Gfra3O35118 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Gfra3O35118 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gfra3O35118 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.64■□□□□ 0.09
Gfra3O35118 Gm11927-201ENSMUST00000118472 759 ntBASIC15.64■□□□□ 0.09
Gfra3O35118 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.64■□□□□ 0.09
Gfra3O35118 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.64■□□□□ 0.09
Gfra3O35118 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Gfra3O35118 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.64■□□□□ 0.09
Gfra3O35118 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gfra3O35118 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gfra3O35118 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gfra3O35118 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gfra3O35118 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gfra3O35118 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gfra3O35118 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.63■□□□□ 0.09
Gfra3O35118 Gm5643-201ENSMUST00000117081 966 ntBASIC15.63■□□□□ 0.09
Gfra3O35118 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Gfra3O35118 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gfra3O35118 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.63■□□□□ 0.09
Gfra3O35118 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.63■□□□□ 0.09
Gfra3O35118 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gfra3O35118 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gfra3O35118 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gfra3O35118 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.63■□□□□ 0.09
Gfra3O35118 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gfra3O35118 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Gfra3O35118 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.62■□□□□ 0.09
Gfra3O35118 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC15.62■□□□□ 0.09
Gfra3O35118 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Gfra3O35118 Gm10812-201ENSMUST00000099864 546 ntBASIC15.62■□□□□ 0.09
Gfra3O35118 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gfra3O35118 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gfra3O35118 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gfra3O35118 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gfra3O35118 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gfra3O35118 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gfra3O35118 Gm18666-201ENSMUST00000190039 958 ntBASIC15.61■□□□□ 0.09
Gfra3O35118 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.61■□□□□ 0.09
Gfra3O35118 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms