Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Trove2O08848 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.57■□□□□ 0.56
Trove2O08848 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Trove2O08848 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trove2O08848 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.57■□□□□ 0.56
Trove2O08848 Gm27801-201ENSMUST00000184174 223 ntBASIC18.57■□□□□ 0.56
Trove2O08848 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trove2O08848 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trove2O08848 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trove2O08848 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trove2O08848 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trove2O08848 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trove2O08848 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trove2O08848 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trove2O08848 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.56■□□□□ 0.56
Trove2O08848 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trove2O08848 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trove2O08848 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Trove2O08848 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trove2O08848 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trove2O08848 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trove2O08848 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trove2O08848 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Trove2O08848 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trove2O08848 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.55■□□□□ 0.56
Trove2O08848 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trove2O08848 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trove2O08848 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trove2O08848 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trove2O08848 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trove2O08848 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trove2O08848 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trove2O08848 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trove2O08848 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trove2O08848 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.55■□□□□ 0.56
Trove2O08848 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trove2O08848 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trove2O08848 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trove2O08848 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trove2O08848 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trove2O08848 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.54■□□□□ 0.56
Trove2O08848 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trove2O08848 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trove2O08848 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.54■□□□□ 0.56
Trove2O08848 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Trove2O08848 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trove2O08848 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trove2O08848 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trove2O08848 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trove2O08848 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
Trove2O08848 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trove2O08848 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trove2O08848 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trove2O08848 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trove2O08848 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trove2O08848 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trove2O08848 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trove2O08848 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trove2O08848 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trove2O08848 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trove2O08848 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trove2O08848 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.52■□□□□ 0.56
Trove2O08848 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Trove2O08848 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.52■□□□□ 0.56
Trove2O08848 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trove2O08848 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.52■□□□□ 0.56
Trove2O08848 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trove2O08848 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trove2O08848 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trove2O08848 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.52■□□□□ 0.55
Trove2O08848 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.52■□□□□ 0.55
Trove2O08848 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.51■□□□□ 0.55
Trove2O08848 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trove2O08848 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms