Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp35M0QWN7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp35M0QWN7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.4■□□□□ 0.7
Usp35M0QWN7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp35M0QWN7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp35M0QWN7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp35M0QWN7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp35M0QWN7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp35M0QWN7 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.4■□□□□ 0.7
Usp35M0QWN7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.4■□□□□ 0.7
Usp35M0QWN7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.4■□□□□ 0.7
Usp35M0QWN7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Usp35M0QWN7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp35M0QWN7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Usp35M0QWN7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp35M0QWN7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp35M0QWN7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.39■□□□□ 0.69
Usp35M0QWN7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp35M0QWN7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp35M0QWN7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp35M0QWN7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
Usp35M0QWN7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp35M0QWN7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Usp35M0QWN7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.39■□□□□ 0.69
Usp35M0QWN7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp35M0QWN7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp35M0QWN7 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.39■□□□□ 0.69
Usp35M0QWN7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp35M0QWN7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp35M0QWN7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp35M0QWN7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.38■□□□□ 0.69
Usp35M0QWN7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Usp35M0QWN7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp35M0QWN7 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.38■□□□□ 0.69
Usp35M0QWN7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp35M0QWN7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp35M0QWN7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp35M0QWN7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp35M0QWN7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.38■□□□□ 0.69
Usp35M0QWN7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Dio3-201ENSMUST00000097228 1449 ntBASIC19.37■□□□□ 0.69
Usp35M0QWN7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Usp35M0QWN7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp35M0QWN7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp35M0QWN7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp35M0QWN7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp35M0QWN7 Gm44549-201ENSMUST00000208351 577 ntBASIC19.36■□□□□ 0.69
Usp35M0QWN7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Usp35M0QWN7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp35M0QWN7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp35M0QWN7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp35M0QWN7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp35M0QWN7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp35M0QWN7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp35M0QWN7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.35■□□□□ 0.69
Usp35M0QWN7 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.35■□□□□ 0.69
Usp35M0QWN7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp35M0QWN7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Gm5643-201ENSMUST00000117081 966 ntBASIC19.34■□□□□ 0.69
Usp35M0QWN7 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.34■□□□□ 0.69
Usp35M0QWN7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp35M0QWN7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms